Gene Cphamn1_1233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1233 
Symbol 
ID6374910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1338414 
End bp1339724 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content49% 
IMG OID642683731 
Productphosphate ABC transporter, inner membrane subunit PstA 
Protein accessionYP_001959646 
Protein GI189500176 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0581] ABC-type phosphate transport system, permease component 
TIGRFAM ID[TIGR00974] phosphate ABC transporter, permease protein PstA 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.542864 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAA GTACAAAAAA GTCTGTTGTA GGAAGTTCTG CTTCTTCCGG GCGGATAAAG 
GCAATAGATA TAGTCAACAA GGGACTGAAA AGGAGGTACA GGAAAGAGAA GCGCTTCAGA
CTCTACGGTA TGCTGTCGAT TCTTGCAAGC GTTGCGTTTC TGGCGTTCCT GTTGACCAGT
ATTGTTTTTA ATGGCTATAG CGCGTTTTTA CAGACCTATA TCAAGCTGGA TGTTCCTCTT
GAGGCAGGAA TGATCGATAA GCAAGAGCCG GGGCGTTCAG ATTTTCAGGG AATCATCAAG
TCAGCGATAA GGAGTTACTA TCCCGAGGTG ACTGAAAGAC AGGATAAGCG GGAACTCTAT
GCGCTTTTCA GCTCAGGGGC GGCTTTTCAG CTGCGTGACA CAGTGTTGAG TAATCCTCCT
GAAGAGGGGA CGACATTGAG TTTATGGGTT CTTGCCGACG ACGATGTCGA TATGCTGATG
AAGGGGCACA TGAAACGAGA TGTCCCTGAA GGGAGTAGAC GATTAAATGA CAAGCAGCTG
CGCTGGATTG AACGGCTGGA GGCAGACAAG AGAGTTGAAA AACGTTTCAA TACAACCTTT
TTTTCCGCTG GTGACTCAAG GGAGCCGGAA CTTGCCGGTA TATGGGGAGC TGTAAAAGGT
TCGATCTACA CCATGCTGGT GACGCTTGCA CTTTCTTTTC CCATAGGTAT CTGCGCGGCA
GTCTACCTTG AAGAGTTTGC TCCAAAAAAT CTTGCTACCG ACTTTATTGA GGTGAACATC
AATAACCTCG CTGCCGTTCC GTCGATTGTT TTTGGTTTGC TGGGACTCGC TGTTTTTCTT
AATTTTTTCG GTATGCCGAG GTCAACCCCG CTTGTCGGAG GTATCGTACT GATGTTGATG
ACCCTTCCGA CCATTATCAT CGCTAGCAGG GCTGCGCTCA AGGCTGTTCC TCCATCTATC
CGCGAAGCCG CATTGGGTGT GGGTTCTTCA AAGCTTCAGG TTGTGGCAAG TCACGTGCTG
CCTCTTGCTT TGCCCGGAAT GCTTACCGGC ACAATCATTG GTATGGCGCA GGCACTCGGT
GAAACCGCAC CGCTCCTGAT GATCGGTATG GTTGCGTTTA TTGTTGACAT TCCAGGAGGC
TTCACCGATC CGGCAGCTGT CATGCCGGTT CAGATTTATC TTTGGGCTGA TAGCCCCGAA
CGGGCTTTTG TGGAGCGGAC ATCGGCTGCC ATTATGGTGC TGCTTGCGTT TCTGATTTCG
ATGAATGCGG TTGCGGTCGT GATGAGGAAA CGTTTTGAGA GACGTTGGTA G
 
Protein sequence
MIKSTKKSVV GSSASSGRIK AIDIVNKGLK RRYRKEKRFR LYGMLSILAS VAFLAFLLTS 
IVFNGYSAFL QTYIKLDVPL EAGMIDKQEP GRSDFQGIIK SAIRSYYPEV TERQDKRELY
ALFSSGAAFQ LRDTVLSNPP EEGTTLSLWV LADDDVDMLM KGHMKRDVPE GSRRLNDKQL
RWIERLEADK RVEKRFNTTF FSAGDSREPE LAGIWGAVKG SIYTMLVTLA LSFPIGICAA
VYLEEFAPKN LATDFIEVNI NNLAAVPSIV FGLLGLAVFL NFFGMPRSTP LVGGIVLMLM
TLPTIIIASR AALKAVPPSI REAALGVGSS KLQVVASHVL PLALPGMLTG TIIGMAQALG
ETAPLLMIGM VAFIVDIPGG FTDPAAVMPV QIYLWADSPE RAFVERTSAA IMVLLAFLIS
MNAVAVVMRK RFERRW