| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1232 |
|---|
| Symbol | |
|---|
| ID | 6374909 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 1337033 |
|---|
| End bp | 1338421 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642683730 |
|---|
| Product | phosphate ABC transporter, inner membrane subunit PstC |
|---|
| Protein accession | YP_001959645 |
|---|
| Protein GI | 189500175 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0573] ABC-type phosphate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00974] phosphate ABC transporter, permease protein PstA
[TIGR02138] phosphate ABC transporter, permease protein PstC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.68269 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.54486 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACCAT TATTATTGTT TCTATTGTTG CTGCTGCTCT CCGTAACAGG ATTTTTTATC
GGTCGGCGCA AAGCTGTCAG TCTTGCAAAA AAAGCGGGAG GGACAAGCCG TCTGCACTCA
CTGCCGGTAT ATTACGGGAC TTTGACCGCA TTTTGGTGCT GTCTCCCGGC GTTTTTCATG
TTTCTGATCT GGTTGAGTTT TGAGCAGAGT ATTATTACCT GGCTTATGGT TGCCGATCTT
CCGGAGCAGG CAAGGGCTCT TCCTCCTGCA CGTCTCAATG TTCTGATAAG CGATATTCAG
GGCCTTGTGA ACGGAAATAT TGTATCCGGA GAGGTGACGC CCCTGATGCG GAGTGCGGCA
GAACACTATA TCAGTCTGAA GGGTATTAGC CAGATGATCA CTTCTGTGAT GGTTCTGGTT
GTCGCTATAG CAGGCATGCT TATGGTTCAT CGACAGATCA AGCCGGAACT TCGTGCCCGG
AATCAGGTTG AGAAAGTTGT TATGGGTTTG CTGGTTGTGT GTTCCACAAT AGCAATTTTT
ACGACAGTCG GCATCGTGCT TTCCATTCTC TATGAGGCTG TCCGGTTTTT TCAGCAGATT
CCGGTCACCG ATTTTCTTTT CGGCCTTGAA TGGAGCCCGC AGATGGCCAT CAGGGAGGAT
CAGGTTGGAT CGTCTGGAGC TTTCGGTGCT GTGCCTGTGT TTGCGGGAAC TATTCTTATT
TCAGCCATCG CCATGTTTAT TGCTGCACCA ATAGGTTTGA TGTCAGCCAT ATTCCTTTCC
GAATACGCCG ACAGACGGCT GCGGTCGGTT GTAAAACCGC TGCTGGAAAT ACTTGCAGGT
GTCCCCACGG TTGTCTACGG TTTTTTTGCC GCTCTGGTGG TTGCGCCCTT GATTCGTAAC
AGCGGAGCGC AATTTGGCAT CGATGTGTCT TCCGAGAGCG CCCTTGCGGC AGGGTTGGTG
ATGGGAGTGA TGATTATCCC TTTTGTCTCT TCTCTTTCCG ATGATGTTAT CAACGCGGTG
CCTCAATCTC TCAGAGATGG AGCATACAGC GTGGGCGCAA CACGATCGGA GACAATCAAG
GATGTCTTGG TGCCGGCAGC TCTTCCTGGA ATTGTTGGAG GACTTCTGCT CGCCGTATCG
CGGGCGATCG GCGAGACCAT GATCGTGGTC ATGGCGGCAG GCCTCTCTGC CAACCTTACG
GCAAATCCTT TACAGGCGGT CACGACAGTA ACCGTTCAGA TCGTTACCCT TCTCGTAGGT
GACCAGGAGT TTGACAGTCC TAAAACCCTT GCAGCGTTTG CGCTTGGTCT TGTGTTGTTT
ATTGGTACGC TTCTTTTGAA CATTATCGCG CTGACATTTG TCAGAAAATA CCGGGAAAGA
TATGATTAA
|
|---|
| Protein sequence | MSPLLLFLLL LLLSVTGFFI GRRKAVSLAK KAGGTSRLHS LPVYYGTLTA FWCCLPAFFM
FLIWLSFEQS IITWLMVADL PEQARALPPA RLNVLISDIQ GLVNGNIVSG EVTPLMRSAA
EHYISLKGIS QMITSVMVLV VAIAGMLMVH RQIKPELRAR NQVEKVVMGL LVVCSTIAIF
TTVGIVLSIL YEAVRFFQQI PVTDFLFGLE WSPQMAIRED QVGSSGAFGA VPVFAGTILI
SAIAMFIAAP IGLMSAIFLS EYADRRLRSV VKPLLEILAG VPTVVYGFFA ALVVAPLIRN
SGAQFGIDVS SESALAAGLV MGVMIIPFVS SLSDDVINAV PQSLRDGAYS VGATRSETIK
DVLVPAALPG IVGGLLLAVS RAIGETMIVV MAAGLSANLT ANPLQAVTTV TVQIVTLLVG
DQEFDSPKTL AAFALGLVLF IGTLLLNIIA LTFVRKYRER YD
|
|---|
| |