| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1229 |
|---|
| Symbol | |
|---|
| ID | 6374906 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 1333844 |
|---|
| End bp | 1334659 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642683727 |
|---|
| Product | phosphate binding protein |
|---|
| Protein accession | YP_001959642 |
|---|
| Protein GI | 189500172 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0226] ABC-type phosphate transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR02136] phosphate binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.994319 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA TGAAAAAACT GTTGATGCTT GTCGCGGTCT GCTGTTTTGC TGCTGCAGGA
CCTGCCCAGG CGGAAACTAT TGTCATGGAC GGTTCAACGA CTGTCGGCCC GATCGCCAAA
TCGTTCGCGG CCTATTTCAC CAAGAACACA GGGGTTCAGG TCAGTGTCAG TGAGTCAGGT
AGCGGTAACG GCGCAAAAAG TCTTATCAAC GGAGCCTGTG ATATTGCCAA CATGTCCCGT
CCGATGAAAT CGAAAGAAGC CGATGCAGCC AAAGCCAAGG GGATAAACGC TGTTGAGCAT
ATTGTCGCTC TTGACGGGCT TTCTGTTGTT GTTCACCCGA GTAACTATGT CACCGCATTG
AAAATCGAGC AGATTCGCGA CATCTACGTT GGGAAAGTCA CGAACTGGAG CAAGGTAGGC
GGTCCTAACG CGAAAATCGT CGTTATTCAG CGTGAATCAA ACAGCGGAAC CCAGGATTCC
TTCAGGAAAC TTGTTGTCGG AAAAGGTAAT CCTGTGACGA AAAGGGCGGA AACCCAGGCA
AGCAATGGCG CAGTGAAAAG CCGCGTGGCA TCCACTCCGG CAGCCATCGG TTTCATCGGG
CTTGGTTTCT TGGATAATTC CGTTAAGCCG CTCATCGTCA ATGGTGTTGC TCCAAGCGAA
GAGACTGTCA AAGACGGGTC GTACCCTGTT GCGCGTCCTT TGTTTATGTA TACTGACGGC
GAGCCGACAG GAAATGTTAA AAAGTTCATC GATCTGCCAA AAACGGAAGA TGGAAAGCGT
ATGATCAGCG AGCTTGGTTA CGTTAACCGT TATTAA
|
|---|
| Protein sequence | MKKMKKLLML VAVCCFAAAG PAQAETIVMD GSTTVGPIAK SFAAYFTKNT GVQVSVSESG
SGNGAKSLIN GACDIANMSR PMKSKEADAA KAKGINAVEH IVALDGLSVV VHPSNYVTAL
KIEQIRDIYV GKVTNWSKVG GPNAKIVVIQ RESNSGTQDS FRKLVVGKGN PVTKRAETQA
SNGAVKSRVA STPAAIGFIG LGFLDNSVKP LIVNGVAPSE ETVKDGSYPV ARPLFMYTDG
EPTGNVKKFI DLPKTEDGKR MISELGYVNR Y
|
|---|
| |