Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1198 |
Symbol | |
ID | 6374875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1295629 |
End bp | 1296096 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642683698 |
Product | UspA domain protein |
Protein accession | YP_001959613 |
Protein GI | 189500143 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.473556 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.580664 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATACAGT TGTCCAAAAT TCTCTGTCCT ACCGACTACT CGAAAACATC AGATAAAGCT GTCCGCTATG CTATAGAACT TGGAAGAAAA GTGAACGCTC ATGTTCGTTT CCTTCATATC ATGCAGCCGG AAAATATCGC CGAGAAAACC GCATACAGTT ATGGTATCTC AAAAAAAGGG GTGCATAGGG ATGTTGTTTC CGAAGAGTTC AGGGTGCTGC TTATGGAAGA AAAGAAAAAG GGACTTTCAG CGGATATTCT GATAATGAGA GGGGATTCCT GTGAAGCTAT CATCGAGCAT TCCCGGGTAT GGGGTGCCGA TCTGCTTATT ATGGGATCAC ATGGAAGGAC CGGCCTGACT CGTATTATGA TGGGCAGTGT TGCCGAAGCG GTGTTTCACA CTGTGGATGT TCCCGTGCTG CTGGTCAAAC AGGATTCTGC CGATAAGGCG GTAAAAGATT ACAGCTAA
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Protein sequence | MIQLSKILCP TDYSKTSDKA VRYAIELGRK VNAHVRFLHI MQPENIAEKT AYSYGISKKG VHRDVVSEEF RVLLMEEKKK GLSADILIMR GDSCEAIIEH SRVWGADLLI MGSHGRTGLT RIMMGSVAEA VFHTVDVPVL LVKQDSADKA VKDYS
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