Gene Cphamn1_1198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1198 
Symbol 
ID6374875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1295629 
End bp1296096 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content46% 
IMG OID642683698 
ProductUspA domain protein 
Protein accessionYP_001959613 
Protein GI189500143 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.473556 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.580664 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACAGT TGTCCAAAAT TCTCTGTCCT ACCGACTACT CGAAAACATC AGATAAAGCT 
GTCCGCTATG CTATAGAACT TGGAAGAAAA GTGAACGCTC ATGTTCGTTT CCTTCATATC
ATGCAGCCGG AAAATATCGC CGAGAAAACC GCATACAGTT ATGGTATCTC AAAAAAAGGG
GTGCATAGGG ATGTTGTTTC CGAAGAGTTC AGGGTGCTGC TTATGGAAGA AAAGAAAAAG
GGACTTTCAG CGGATATTCT GATAATGAGA GGGGATTCCT GTGAAGCTAT CATCGAGCAT
TCCCGGGTAT GGGGTGCCGA TCTGCTTATT ATGGGATCAC ATGGAAGGAC CGGCCTGACT
CGTATTATGA TGGGCAGTGT TGCCGAAGCG GTGTTTCACA CTGTGGATGT TCCCGTGCTG
CTGGTCAAAC AGGATTCTGC CGATAAGGCG GTAAAAGATT ACAGCTAA
 
Protein sequence
MIQLSKILCP TDYSKTSDKA VRYAIELGRK VNAHVRFLHI MQPENIAEKT AYSYGISKKG 
VHRDVVSEEF RVLLMEEKKK GLSADILIMR GDSCEAIIEH SRVWGADLLI MGSHGRTGLT
RIMMGSVAEA VFHTVDVPVL LVKQDSADKA VKDYS