Gene Cphamn1_1192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1192 
Symbol 
ID6374869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1287889 
End bp1288656 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content48% 
IMG OID642683692 
Productanaerobic ribonucleoside-triphosphate reductase activating protein 
Protein accessionYP_001959607 
Protein GI189500137 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1180] Pyruvate-formate lyase-activating enzyme 
TIGRFAM ID[TIGR02495] anaerobic ribonucleoside-triphosphate reductase activating protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0898725 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGTG TACACTGTCT GACAACAGAG GCAAAAACAG GGTCGGGAGC CGGCGAAGTG 
TTTTCCCGGC TTCCTGTGGG AGGATTTCTC AAGCAGAGCC TGATTGATTA TCCGGGGAGG
ATTTCAGCCG TTATCTATAC CATGGGCTGT AATTTTCGCT GCGTGTACTG TCATAATCCA
GAACTGGTTG TTTCTGAAAG GCTTGCCGAA ACCGTGCCGC TTGTCAATGA AGAGCTGTTT
GCCTGGCTTT CTTTGAACAG GGCTCTTCTT GACGCGGTTG TCATCACCGG CGGGGAGCCG
ACGATGCACG CTGTGCTGCC GGAATTCATC AGGAGAATAA AAACTCTTGA GCTTGACGTG
AAGATCGATA CCAACGGTAC CAATCCTGCG ATGCTCGAAG GTCTGATTGA TGATGAGCTT
GTTGATTATG TAGCTCTTGA CATCAAAGCG CCTCTGGTTT ATCGGCAATA CGTCAGCATC
TGCGGAGGTG AATGTACCGA ATCTCTGCTC GATCGTATTC GCGGTTCTCT CGATCTGCTG
CATCGAGCAG GGATTCCCTG TGAAGTTCGG ACAACTCTGC TCAGGCCATA CCATGACGAG
AATGATATCT ATGAGATTGC CCGGATAATT CGAGTCCCGT TTATTCTTCA GAATTGTCGT
CTTGAAAAAA CACTGAAGAA TTCAGCCGGA AAGGTGTTTG TGAAGGAGGA TATTCTGAAA
ATTATCGAAT CGTTAGAACC AAATAGAGGG AATGTGTGTT TAAGGTGA
 
Protein sequence
MSGVHCLTTE AKTGSGAGEV FSRLPVGGFL KQSLIDYPGR ISAVIYTMGC NFRCVYCHNP 
ELVVSERLAE TVPLVNEELF AWLSLNRALL DAVVITGGEP TMHAVLPEFI RRIKTLELDV
KIDTNGTNPA MLEGLIDDEL VDYVALDIKA PLVYRQYVSI CGGECTESLL DRIRGSLDLL
HRAGIPCEVR TTLLRPYHDE NDIYEIARII RVPFILQNCR LEKTLKNSAG KVFVKEDILK
IIESLEPNRG NVCLR