Gene Cphamn1_1190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1190 
Symbol 
ID6374867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1284398 
End bp1285291 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content49% 
IMG OID642683690 
Productprotein of unknown function DUF344 
Protein accessionYP_001959605 
Protein GI189500135 
COG category[S] Function unknown 
COG ID[COG2326] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0883712 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGACA TCAGGATCAA GGATTTCAGG GTGCAGGAAG GGCGGAAGGT TTCGCTCAAC 
GAATGGCCGA CCCGTACCTC GAAAATATAT TCCTCAAAAG AGCAGTACAG GGAGATACTG
AAAAAGCATG TCGAAGAACT CAGTGAGTTG CAGCGCATTC ATTACGCGGA TAACCGTTAC
GCTGTTCTGC TGATTTTTCA GGCAATGGAT GCCGCAGGTA AAGACGGCGC CATACGTCAC
GTTATGTCCG GGATAAACCC GCAGGGGTGC CAGGTGTTCA GTTTCAAGCA TCCTTCACCC
AGAGAGCTGG ATCACGATTT TCTCTGGCGC ACAAACTGTT CTCTTCCCGA GAGAGGAAAG
ATCGGGATTT TCAACCGCTC ATATTACGAA GAGGTGCTGA TTGTCCGGGT GCATCCTGAG
ATACTCATGA GCCAGCAGAT ACCTGAAGAT CTGCTCAACG GAGAAGATGT ATGGAAAGAT
CGTTTCCGAT CGATCAACAA CATGGAGCAC CATCTCTATC ATAACGGAAC CAGAATCGTC
AAGTTCTTTC TGCATTTGTC CAGAGAGGAG CAGCGCCAGC GATTTTTGCG CCGCATTGAC
TCGCCTGAGA AAAACTGGAA GTTCAGCATA GCCGATATTG AAGAGAGAAA GTGCTGGAAC
AGATACATGG CGGCCTATGA AGACTGTATC AGTGAAACCA GTACCGAACG GGCCCCTTGG
TACATCGTTC CCGCCGATGA CAAAAAAAAC GCACGCCTCA TTGTGTCAAA GATAATTCTC
GAAACATTTC TTTCGCTCAA CATGTCCTAT CCTGAAACCG GCAAGGAGCG GCGGCAGGAG
TTGCTGAAAA TCAGAGAGCT TCTTGTCCAG GAAGGGAAAA TAGACGGGTT GTAG
 
Protein sequence
MGDIRIKDFR VQEGRKVSLN EWPTRTSKIY SSKEQYREIL KKHVEELSEL QRIHYADNRY 
AVLLIFQAMD AAGKDGAIRH VMSGINPQGC QVFSFKHPSP RELDHDFLWR TNCSLPERGK
IGIFNRSYYE EVLIVRVHPE ILMSQQIPED LLNGEDVWKD RFRSINNMEH HLYHNGTRIV
KFFLHLSREE QRQRFLRRID SPEKNWKFSI ADIEERKCWN RYMAAYEDCI SETSTERAPW
YIVPADDKKN ARLIVSKIIL ETFLSLNMSY PETGKERRQE LLKIRELLVQ EGKIDGL