| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1181 |
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| Symbol | |
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| ID | 6374856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 1271577 |
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| End bp | 1272956 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642683679 |
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| Product | Carotene 7,8-desaturase |
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| Protein accession | YP_001959596 |
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| Protein GI | 189500126 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3349] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02731] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000113252 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0145788 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGAAA AAAACAAGTC AGTTCTGATT CTCGGTGGCG GTCTTGCGGG GCTTACAGCG
GCAAAGCGTC TGATAGATCG GGGATTTTCG GTAACACTGC TTGAAAAACG TTCGATATAC
GGAGGGAAAG TTTCCTCATG GAAAGATGAG GAAGGGGACT GGATAGAATC CGGCACGCAC
TGTTTTTTTG GCGCATATGA TGTTCTCTAT GATCTCATGC GGGAGATAGG TACCTATCAG
TCAGTGCTCT GGAAAGACCA TAAGCTTACC TATACGCTTT CCGGAGGGGA CAGCTTCACG
TTCAATACCT GGGAGATGCC AAGTCCGCTT CACCTGGTGC CGGCAATTGT CAATAACGGT
TATTTCAGGT TTCGTGAAAT GCTCTCTTTT GCCAAATCGC TGGTGCCTCT TGCCGTCAAG
AAGGACAAAT ATCCTCCCAC CCAGGACCAT CAGACTTTCA CAGCATGGGC AAAACAGCAC
AAGTTCGGTG ATCGTCTTCT GGAAAAAATG TTCAGGCCTA TGGCCCTCGC GCTCAAGTTT
ATTCCTCCGG AAGAGATCTC CGCGAAGATC ATACTTGACG TCACAGAGGT GTTTTTTCGT
ATCCCGGACG CCTCATGTAT GGGTTTTCTA AAAGGTTCGC CGCAGGATCA TCTTATCAAT
CCCCTGTATG AATATTCCGG GAGCAGGGGT GTTGAGTTCC TGCTGGGGAA AGCGGCGGAA
GAGTTGCTTT ATGAGAATGG AGAGATACAA GGGGTTCGCC TGTCCAATGG AGATATTCTT
CGCGCGGATT ATTATCTCTG CGCCCTGCCC GTGCATAATC TCAACAAGGT CATGCCGGGT
AGTTTGAAGA GCGACAATCC GTTTTTCAGC GACCTTGAAA AACTCCAGGG GGTACCGGTG
ATATCTGTCC AGATATGGTA CGACCGGAAG ATTACCGGGG AAGATAATGT GCTGTTCAGT
CCAGACGGTG TGATACCCGT CTACGCGGAT CTTGCCAATA CAACCCCTGA ATACAGGACA
TTACGGGGGA AACCTTTCGA TAACAAATCC CGTTTCGAGT TCTGTGTGGC TCCGGCAAAG
GAGCTGATGC AGCTTTCTAA AGAAGAGATT ATTGCAAGGG TTGATCAAAG TATCCGGAAC
TGTTATCCTG AAACCTCAAA AGGGGCTGAG ATTCTTAAAT CAACACTGGT GAAAATCCCT
CAGTCGGTCT ACGCGCCATT GCCGAATATG GAGCAGTACA GGCCGACGCA GAAAACGCCT
GTTTCCAATC TCTTCCTTGC GGGAGGATTT ACGCAGCAGC TCTACTACGA CTCGATGGGG
GGAGCGGTGA TGAGCGCTAA CCTTGCCTCC GGGGAGATTC TTCGCGTGGC GGGGGGATAG
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| Protein sequence | MQEKNKSVLI LGGGLAGLTA AKRLIDRGFS VTLLEKRSIY GGKVSSWKDE EGDWIESGTH
CFFGAYDVLY DLMREIGTYQ SVLWKDHKLT YTLSGGDSFT FNTWEMPSPL HLVPAIVNNG
YFRFREMLSF AKSLVPLAVK KDKYPPTQDH QTFTAWAKQH KFGDRLLEKM FRPMALALKF
IPPEEISAKI ILDVTEVFFR IPDASCMGFL KGSPQDHLIN PLYEYSGSRG VEFLLGKAAE
ELLYENGEIQ GVRLSNGDIL RADYYLCALP VHNLNKVMPG SLKSDNPFFS DLEKLQGVPV
ISVQIWYDRK ITGEDNVLFS PDGVIPVYAD LANTTPEYRT LRGKPFDNKS RFEFCVAPAK
ELMQLSKEEI IARVDQSIRN CYPETSKGAE ILKSTLVKIP QSVYAPLPNM EQYRPTQKTP
VSNLFLAGGF TQQLYYDSMG GAVMSANLAS GEILRVAGG
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