Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1178 |
Symbol | |
ID | 6374853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1269477 |
End bp | 1270460 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642683676 |
Product | Transketolase central region |
Protein accession | YP_001959593 |
Protein GI | 189500123 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3958] Transketolase, C-terminal subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0058066 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0131189 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGAAC AAAACATCAT GGCTGAGGCC GTGAAATATG TTTCGCGCGG ATCAGTCGCT ACCCGCAAAG GATTTGGTGA CGCCCTTCTG GAGATCGGCA GGCAGGATCC TGATGTCGTG GCCTTGTGCG CTGATCTGAC CGGATCACTC CAGATGCATC ATTTTCAGAA AGAGTTTCCC TCCCGTTTTT TTCAGGTCGG AATTGCCGAG GCGAACATGA TATCCATTGC CGCCGGTCTG GCAACTACAG GAAAAAAACC GTTTGCCGGG ACTTTTGCCG CTTTTGCCTC AGGGAGGGTA TACGACCAGA TCCGTCAGTC GATCTGCTAT TCCCGTCTCA ATGTCAGGAT ATGCGCCTCA CACGCAGGCC TTACTCTCGG AGAGGACGGC GCGACGCACC AGATGCTTGA AGATATTGGT CTCATGCGCG GATTGCCAGG AATGACCGTT GTCGTTCCTG CTGATTACAG CGAAACAAAA CGGGCCGTGA AAGCGCTGCA CAAACATGAA GGTCCTGCCT ATCTGCGATT CGGAAGGCCT TCTGTTCCGG ATTTCACCCT TGATGATGAT GGTTTCGAGA TAGGAAAATC AATCGAACTG AACTCTGGAA AAGATGTAAC GGTTATTGCT TGTGGCATCA TGGTATGGCA AGCGCTCGAG GCGGCCCGTA TACTTGAAAA AGAAGGGGTT ACTGTACGAG TGATCAATAT GCATACGATC AAGCCTGTCG ATAAGCTGGC TATTGTCCGT GCGGCAAACG ATACCGGTGC AATTGTTACC GCCGAGGAGC ATCAGGTTCA TAATGGTCTC GGTGACGCGG TGGCTCATGT GTGCGCGGAA ACGATTCCGG TGCCTATTGA GATGGTTGGA GTCGAAGATG TGTTCGGTGA GTCAGGGAAG CCGGATGAGC TGATGAGTAA GTATAATCTG GCAATTGAAG ATATTCTTGA AAAGATATAC CTGGCACTGC GCAGGAAAGA GTAA
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Protein sequence | MAEQNIMAEA VKYVSRGSVA TRKGFGDALL EIGRQDPDVV ALCADLTGSL QMHHFQKEFP SRFFQVGIAE ANMISIAAGL ATTGKKPFAG TFAAFASGRV YDQIRQSICY SRLNVRICAS HAGLTLGEDG ATHQMLEDIG LMRGLPGMTV VVPADYSETK RAVKALHKHE GPAYLRFGRP SVPDFTLDDD GFEIGKSIEL NSGKDVTVIA CGIMVWQALE AARILEKEGV TVRVINMHTI KPVDKLAIVR AANDTGAIVT AEEHQVHNGL GDAVAHVCAE TIPVPIEMVG VEDVFGESGK PDELMSKYNL AIEDILEKIY LALRRKE
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