Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1163 |
Symbol | |
ID | 6374838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1251046 |
End bp | 1252185 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642683662 |
Product | glucose sorbosone dehydrogenase |
Protein accession | YP_001959579 |
Protein GI | 189500109 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00834081 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGGCTAT TACCCTTAAA GAGTTGTCTG TCATTGTTTC TGGTCATGAT TTCCTGCAAT GCTTGTGCCG AGCCTGTTAG TAACAGGATT GAGGGGAATG CGGGCTCAAG TCTCCTATCC GAGAGTTTTG GGACATTCAA TGAACCCTGG GCCATGACTT TTCTTCCGGA TGGTGATCTC CTGGTAACTG AAAAAGGAGG AACTCTGCTT CTGGTCAAAC CGGATGACCG TTCCAGGGTT CCGGTCCAGG GTGTACCCGA GGTGGCTTAC GGTGGTCAGG GCGGCCTTGG TGATATAATT CTGCACCCTC GATATATGGA TAACAACTGG ATTTACCTGT CATATGTCGA GCAGGATGCT TCAGGAAAGA GGGGAGCAGC AGTTGCCCGG GCTCGATTTC GGCCAGCATC GGCCGGGGCA AAACTGGAAA ACCTCGAAGT CATCTGGCGG CAAGAGCCTA AAGTATCTGG CAACGGGCAT TACTCATACA GGTTGGCATT CAGCCCGGAT GGGCATCTTT TTATCACTTC CGGTGATCGT CAAAAACAGA CGCCGGCACA GAGCTGGAGA CAAAGTCTTG GCAAGGTGAT CAGGTTAAAC GCGGATGGAT CAGTCCCACC GGACAATCCG TTTCAGGATA AAGGAGAACT TGCAAAAACC TTCTGGTCTC TCGGGCATCG AAATCTTCTT GGGATTGCAT TTGACAAAAA GGGGCAACTG TGGACACACG AAATGGGCCC CAGGAACGGT GATGAATTCA ACCTGACCAT TGGTGGAGAT AATTACGGTT GGCCCATTGT ATCATGGGGC GATCACTACT CCGGTCTTCC AATTCCCGAT CATGATACGC GTCCGGAATT CAATGCACCG GAGATATACT GGGTACCAAC CGTTGCACCT TCAGGCCTGA TACTCTACTC CGGTTCTCTG TTTCCGGCGT GGCAGGGCAA TGCCTTTATC GGAGGGCTCA GATCACAATC ACTGATACGG ATCAGGATTG AAGGGAACCA GGCGGAGGAG GTCGAACGTT TTTCCATGGG AAAACGAATA CGGGAGGTTG AGCAAGGACC AGACGGCGCC ATATGGGTTC TGGAGGATAC TAATGGTGGC CGCCTGATCC GCCTCAGCGA ATACAAGTAG
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Protein sequence | MRLLPLKSCL SLFLVMISCN ACAEPVSNRI EGNAGSSLLS ESFGTFNEPW AMTFLPDGDL LVTEKGGTLL LVKPDDRSRV PVQGVPEVAY GGQGGLGDII LHPRYMDNNW IYLSYVEQDA SGKRGAAVAR ARFRPASAGA KLENLEVIWR QEPKVSGNGH YSYRLAFSPD GHLFITSGDR QKQTPAQSWR QSLGKVIRLN ADGSVPPDNP FQDKGELAKT FWSLGHRNLL GIAFDKKGQL WTHEMGPRNG DEFNLTIGGD NYGWPIVSWG DHYSGLPIPD HDTRPEFNAP EIYWVPTVAP SGLILYSGSL FPAWQGNAFI GGLRSQSLIR IRIEGNQAEE VERFSMGKRI REVEQGPDGA IWVLEDTNGG RLIRLSEYK
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