Gene Cphamn1_1159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1159 
Symbol 
ID6374834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1248630 
End bp1249658 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content47% 
IMG OID642683659 
Producthypothetical protein 
Protein accessionYP_001959576 
Protein GI189500106 
COG category[S] Function unknown 
COG ID[COG3586] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.569694 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0202487 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAACA AAGCGTTGCA CCGGACGGCA AAAAGCGCCG CCGGTGAACT CAATGTTAGA 
AGCTGGAGAA AGAACAGGAG AACCTTTCAT ATGCCACTAT TTGAGATGTC CGGGAAAAAC
CTTACTCCTG TAGAGCAAGC GAACTTCGCT CTGGAGAAGG AACTGCAGAC GCTTATCGAG
AAGAACCTTG CTGTGGTGTT TAACTGCCGT TTTGTTGCCT CGGAATTCTC AACGGGTGCG
TTACATGCCG GGCGCATAGA CAGCCTCGCG TTGTCCGAGG ACAACAATCC CGTAATTATT
GAATACAAGA AAGTTGAATC TTCCGAGCTT ATAAACCAGA GCCTGTTCTA CCTCCACTGG
ATTCAAGATC ACAAGGGCGA TTTTGAAATA GCCGTTCAGC GGAAACTTGG AAACGGCGTC
GAAGTAGACT GGTCAGATGT TCGAGTTATC TGCATTGCAC CGAACTATAA GAAATATGAC
GTACATGCGG TTCAAGTGAT GGGTGCAAAT ATAGAGCTAT GGAAGTACCG CCTGTTCAAA
AATGAATCTA TATATCTTGA AGAGGTGTTC CAGGCAACAA AAGTCACCGC ATCGCCTTCT
TCTGTCTATG GAGGAAAGAA CCCTGTCATG GTGGAGGCCG GGAAAAAGGC TGCTCAGGTT
CGCGCTACAG CCACGTATGA ATTCGACGAA CACCTTGAAG GAAAGCCAGC GCACATCCAG
TCCCTCATGC ACAGCATTCG GGAATTCATT GTCGGGCTTG ATCCGGCTAT CGAGGAAGTG
CCAAAGAAAT TCTACGTTGC TTATAAGATT TCTCAGAATA TTGTCTGCAT GGAGCCGCAG
AGTCGAAACA TTAAGCTCTT CGTAAAACTG AGTGCCACCA ATGTTGAGTC GCCGCCGAAG
TTCTATCGTG ATGTCACCGA AATCGGGCAC TATGGCACGG GTGATACTGA ATTCACTATT
TCTTCGGAAC AAGACTTTGA ACTGATAAAG CCATACATTG AGGCGGCATA CAACAAGGTT
GGCGGGTAA
 
Protein sequence
MYNKALHRTA KSAAGELNVR SWRKNRRTFH MPLFEMSGKN LTPVEQANFA LEKELQTLIE 
KNLAVVFNCR FVASEFSTGA LHAGRIDSLA LSEDNNPVII EYKKVESSEL INQSLFYLHW
IQDHKGDFEI AVQRKLGNGV EVDWSDVRVI CIAPNYKKYD VHAVQVMGAN IELWKYRLFK
NESIYLEEVF QATKVTASPS SVYGGKNPVM VEAGKKAAQV RATATYEFDE HLEGKPAHIQ
SLMHSIREFI VGLDPAIEEV PKKFYVAYKI SQNIVCMEPQ SRNIKLFVKL SATNVESPPK
FYRDVTEIGH YGTGDTEFTI SSEQDFELIK PYIEAAYNKV GG