Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1158 |
Symbol | |
ID | 6374833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1247544 |
End bp | 1248626 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642683658 |
Product | HNH endonuclease |
Protein accession | YP_001959575 |
Protein GI | 189500105 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.161614 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0199852 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATAG AATTTAAAGA AATTACAGTC CGAGACCTTA CAAATGGCTA CCACGACAAC GAAGAAAACG GTGTTGTTGG TTATGATGGA AAATTAGATA TTCGCCCACC TTATCAAAGA GAATTTATTT ACAAGGACAA ACAGCGAGAC GCTGTAATTG ACACCATTAC AAAGGACTTC CCTTTGAATG TAATGTATTG GGCAGTTCGT GAGGACGGTA ACTTTGAAGT AATTGACGGA CAGCAAAGGA CAATTTCAAT AAGTCAATTT ATTGAAGGAG ATTTTGCCTT TAAAAGCAGA TACTTCCACA ACTTACAAAA AGACGAGCAA GAGCAAATTT TGAATTACGA GATAATGGTT TATCTGTGTA GCGGAACAGA CAGCGAAAAA TTAGAGTGGT TCAAAACAAT CAACATTGCA GGAGAAAAAC TCACCGACCA AGAGTTAAGA AATGCAGTTT ATTCGGGTTC GTGGGTTGCA GATGCAAAAA GATATTTCAG CAAAAATGGT TGTGCTGCAT ACGGTTTGGG CGGCGACTAC TTGAACGGGA CAGCAATCAG GCAAGACTAT TTAGAAACAA CAATTAAGTG GATAAGCAAT GACGGCATTG AGCATTATAT GGCAAAACAA CAACACGAAC CAAATGCCAA TGATTTGTGG TTGTATTTTC AGAGTGTAGT AAACTGGGTA AAAGCAGTCT TTCCAAAGTA TCGCAAAGAA ATGAAAGGTA TTCAATGGGG CTTTCTTTAC AACGAGTATA AGGACAAGAA ATTTGACCAC ACAAAACTTG AAGACAAAAT TACCAAACTA ATGCAAGACG AGGACGTAAC CAACAAAAAA GGGATTTACG AATACGTTTT GACGCACAAA GAGAAGTTAT TAAATATTCG TGCATTTACC GATAACCAAA AACGTGAAGC ATACGAAAGA CAGAAAGGAA TTTGCCCGGT ATGCACAGAA GAATATAAAA TTGAAGAAAT GGAAGCCGAC CACATTACAC CTTGGCATTT AGGCGGACAG ACAAGTGCTG AAAATTGCCA AATGCTTTGT AAAGATGATA ATAGGAGAAA ATCAGGAAAA TAA
|
Protein sequence | MKIEFKEITV RDLTNGYHDN EENGVVGYDG KLDIRPPYQR EFIYKDKQRD AVIDTITKDF PLNVMYWAVR EDGNFEVIDG QQRTISISQF IEGDFAFKSR YFHNLQKDEQ EQILNYEIMV YLCSGTDSEK LEWFKTINIA GEKLTDQELR NAVYSGSWVA DAKRYFSKNG CAAYGLGGDY LNGTAIRQDY LETTIKWISN DGIEHYMAKQ QHEPNANDLW LYFQSVVNWV KAVFPKYRKE MKGIQWGFLY NEYKDKKFDH TKLEDKITKL MQDEDVTNKK GIYEYVLTHK EKLLNIRAFT DNQKREAYER QKGICPVCTE EYKIEEMEAD HITPWHLGGQ TSAENCQMLC KDDNRRKSGK
|
| |