Gene Cphamn1_1158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1158 
Symbol 
ID6374833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1247544 
End bp1248626 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content38% 
IMG OID642683658 
ProductHNH endonuclease 
Protein accessionYP_001959575 
Protein GI189500105 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.161614 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0199852 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAG AATTTAAAGA AATTACAGTC CGAGACCTTA CAAATGGCTA CCACGACAAC 
GAAGAAAACG GTGTTGTTGG TTATGATGGA AAATTAGATA TTCGCCCACC TTATCAAAGA
GAATTTATTT ACAAGGACAA ACAGCGAGAC GCTGTAATTG ACACCATTAC AAAGGACTTC
CCTTTGAATG TAATGTATTG GGCAGTTCGT GAGGACGGTA ACTTTGAAGT AATTGACGGA
CAGCAAAGGA CAATTTCAAT AAGTCAATTT ATTGAAGGAG ATTTTGCCTT TAAAAGCAGA
TACTTCCACA ACTTACAAAA AGACGAGCAA GAGCAAATTT TGAATTACGA GATAATGGTT
TATCTGTGTA GCGGAACAGA CAGCGAAAAA TTAGAGTGGT TCAAAACAAT CAACATTGCA
GGAGAAAAAC TCACCGACCA AGAGTTAAGA AATGCAGTTT ATTCGGGTTC GTGGGTTGCA
GATGCAAAAA GATATTTCAG CAAAAATGGT TGTGCTGCAT ACGGTTTGGG CGGCGACTAC
TTGAACGGGA CAGCAATCAG GCAAGACTAT TTAGAAACAA CAATTAAGTG GATAAGCAAT
GACGGCATTG AGCATTATAT GGCAAAACAA CAACACGAAC CAAATGCCAA TGATTTGTGG
TTGTATTTTC AGAGTGTAGT AAACTGGGTA AAAGCAGTCT TTCCAAAGTA TCGCAAAGAA
ATGAAAGGTA TTCAATGGGG CTTTCTTTAC AACGAGTATA AGGACAAGAA ATTTGACCAC
ACAAAACTTG AAGACAAAAT TACCAAACTA ATGCAAGACG AGGACGTAAC CAACAAAAAA
GGGATTTACG AATACGTTTT GACGCACAAA GAGAAGTTAT TAAATATTCG TGCATTTACC
GATAACCAAA AACGTGAAGC ATACGAAAGA CAGAAAGGAA TTTGCCCGGT ATGCACAGAA
GAATATAAAA TTGAAGAAAT GGAAGCCGAC CACATTACAC CTTGGCATTT AGGCGGACAG
ACAAGTGCTG AAAATTGCCA AATGCTTTGT AAAGATGATA ATAGGAGAAA ATCAGGAAAA
TAA
 
Protein sequence
MKIEFKEITV RDLTNGYHDN EENGVVGYDG KLDIRPPYQR EFIYKDKQRD AVIDTITKDF 
PLNVMYWAVR EDGNFEVIDG QQRTISISQF IEGDFAFKSR YFHNLQKDEQ EQILNYEIMV
YLCSGTDSEK LEWFKTINIA GEKLTDQELR NAVYSGSWVA DAKRYFSKNG CAAYGLGGDY
LNGTAIRQDY LETTIKWISN DGIEHYMAKQ QHEPNANDLW LYFQSVVNWV KAVFPKYRKE
MKGIQWGFLY NEYKDKKFDH TKLEDKITKL MQDEDVTNKK GIYEYVLTHK EKLLNIRAFT
DNQKREAYER QKGICPVCTE EYKIEEMEAD HITPWHLGGQ TSAENCQMLC KDDNRRKSGK