Gene Cphamn1_1115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1115 
Symbol 
ID6374790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1200428 
End bp1201546 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content48% 
IMG OID642683617 
Productcyclopropane fatty acyl phospholipid synthase 
Protein accessionYP_001959534 
Protein GI189500064 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.9654 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGACC AATACTGCAA ATATCAGGTT GAAAAGCTTT TTGACAGTGC AGGCATCCGT 
GTCAACGGTT CAAATCCCTG GGACATCACG GTACATGACA ACAGTCTGTA CCCACACATT
GTCGTAAACG GCAACCTGGG TTTCGGGGAA ACCTACATGG ACGGTTGCTG GGATTGTGAT
GCACTTGACG AGCTGTTCTA CAGGATCCTT CGCAACCGCA TAAACAGAAA AGTAGGTGTT
CTCAATCATT TGGCGCACGC TCTTATCGGG CATATACGCA ACTTTCAGAA TCCATCAAGA
TCATTCATTG TAGGCGAAAA GCACTACAAC ACCGGCAACG ACCTCTTTGC CGCAATGCTT
GGCCCCGGTA TGAACTATAG TTGCGGCTAC TGGGAAAACT GCGACAATCT CGAAGAAGCC
CAGAACAGGA AACTGCGACT TGTTTTCGAA AAACTGACCT TGCAACCAGG CATGAAGGTA
CTTGATATCG GATGTGGCTG GGGAGGCGCT GCCCGATATG CCGCCGAGAA CTATGGCGTG
GAGGTCACAG GAGTTACGAT TTCGCAAAAG CAGGCCGATT ACGCGAAGAA ATACTGCGAG
GGTCTGCCTG TTTCGATACA ACTTTGCGAC TACCGTAAAC TCCAAGGAAA CTACGACCGG
ATCTATTCAA TCGGCATGTT TGAACATGTA GGCTACAAGA ATTACCGCCA CTTCTTTGAC
GTAATCGACC GATGTATTTC AACTGACGGG CGTTGCCTGC TGCATACTAT CGGGGGAAAC
GAACCCTCGA CCTGCACGGA CCCATGGATA AGCAGGTATA TTTTTCCTAA TTCGATGATT
CCGTCAGCAA GCCAGATAAC TTCCTCTTAT GAAGGGAAGT TGGTACTTGA AGACTGGCAT
GTATTCGCCT ACGACTATTA CCTTACGCTT AAATCATGGC ATCAGAATGT GCTGAATAAC
CGGAAGAACC TTGAGGCCGA CTACTGCGAA AGGTTTTTCA GAATGTGGGA ATACTATCTG
CTCAGCTGCG CCGGCGCTTT CCGCGCAAGA CATCTTCAGA TATGGCAGCT CCTTCTGACA
CCCAAAGGAA TTACCGGAAG ATACCGTGTC CCGAGATAA
 
Protein sequence
MFDQYCKYQV EKLFDSAGIR VNGSNPWDIT VHDNSLYPHI VVNGNLGFGE TYMDGCWDCD 
ALDELFYRIL RNRINRKVGV LNHLAHALIG HIRNFQNPSR SFIVGEKHYN TGNDLFAAML
GPGMNYSCGY WENCDNLEEA QNRKLRLVFE KLTLQPGMKV LDIGCGWGGA ARYAAENYGV
EVTGVTISQK QADYAKKYCE GLPVSIQLCD YRKLQGNYDR IYSIGMFEHV GYKNYRHFFD
VIDRCISTDG RCLLHTIGGN EPSTCTDPWI SRYIFPNSMI PSASQITSSY EGKLVLEDWH
VFAYDYYLTL KSWHQNVLNN RKNLEADYCE RFFRMWEYYL LSCAGAFRAR HLQIWQLLLT
PKGITGRYRV PR