Gene Cphamn1_1114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1114 
Symbol 
ID6374789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1198888 
End bp1200129 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content49% 
IMG OID642683616 
Producthypothetical protein 
Protein accessionYP_001959533 
Protein GI189500063 
COG category[S] Function unknown 
COG ID[COG3876] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTATGAAT CCGGAACAAA TGATGTGAAG AACCCAGGAT TAATTTTTTT CTTTTTTCTC 
TGTTTTTTGA TCGTCTCCCG GCCGCTTCTG TCGCGGCAGC TGCTTTCGGG CCTCGATGTG
CTCGATGCGG AACGTTGCCA AAGGCTCAAG GGGAAAAGAG TCGCATTGAT AACCAATGCC
GCCGGAGTAA GTTCTACAGG GGAAGACGGC TACAAAGTAT TTCTTCGCCA CGGTCTTGAT
TTGAAATACC TGATGGCTCC GGAGCATGGT TTCCGTGCAG TCGTCAAGGC TGGCGATAGT
GTTGAAGATG AAACGCTTGC CGGTGATCTC AAGGTGTATT CATTATACGG TGCCGCCAGG
AAGCCGGATG TTCAACTGTT GAAAAATACG GTTGACGTTC TGGTTTTTGA CCTGCAGGAT
GTCGGTGTCC GTTGTTATAC CTATATTTCA ACCATGCGGT ATGCCATGGA GGCCTGCCAG
GAAGCTGGTG TTTCTTTCAT GGTGCTTGAT CGTATGAATC CTCTTGCCCC GCTGCCCGCG
GAGGGGTTTA TGCTGGATCC TGAAAAGAGT TCTTTTGTCG GTATGGTTCC TGTTCCGTTT
ATTCATTCCA TGACGGTAGG CGAGATTGCC TGTTTCCTGA AAAAACGGTA CTATCAGGAG
CTCGATCTGA AGGTTGTCGC CATGAACGGG TATGATTCGC GCCGCTTTGC TGATGAATAT
TCCTCAGCAC AATTCATCTC TCCCTCTCCG AATATTCGAG ATCTTCAAAC CGTTCTGGTC
TATCCTGCGA CGGTGTTCCT CGAAGCGACA AATGTCAGCG AAGGTCGCGG GACTCTGCTG
CCGTTCAGGC AGTTCGGAGC CCCGTTCATC AATGCAGGTT TTTTGAAAGA TGAACTTGAC
GCACACAGGC TTCCAGGTGT TTCCTTCAAG GAGGTACAGT TCACTCCTTC ATCAAGCAAG
TTTGCGGGTC TGCAATGCGG AGGGGTGCAG CTGAACGTCA CTGACCGTAT GGTTTTTGAA
CCGTTCAGAA CCGGTGTCGC TATTATGCTG ACGTTGAAGA AGCTCTATCC TGAACTTTTT
GATCTGCATT CCAGGGGCGA CTTTCTTGAT AAGCTTGCAG GAACATCTCT TTTTCGCAGG
ATGGTTGAAT CAGATCTTAC GCTTGAAGAG ATTCTTGCCG CATCGAGGTT GCAGGTTCAT
GCGTTCGAGC AGGCAAATCC TGACAGGTTT CTGTATAAGT AG
 
Protein sequence
MYESGTNDVK NPGLIFFFFL CFLIVSRPLL SRQLLSGLDV LDAERCQRLK GKRVALITNA 
AGVSSTGEDG YKVFLRHGLD LKYLMAPEHG FRAVVKAGDS VEDETLAGDL KVYSLYGAAR
KPDVQLLKNT VDVLVFDLQD VGVRCYTYIS TMRYAMEACQ EAGVSFMVLD RMNPLAPLPA
EGFMLDPEKS SFVGMVPVPF IHSMTVGEIA CFLKKRYYQE LDLKVVAMNG YDSRRFADEY
SSAQFISPSP NIRDLQTVLV YPATVFLEAT NVSEGRGTLL PFRQFGAPFI NAGFLKDELD
AHRLPGVSFK EVQFTPSSSK FAGLQCGGVQ LNVTDRMVFE PFRTGVAIML TLKKLYPELF
DLHSRGDFLD KLAGTSLFRR MVESDLTLEE ILAASRLQVH AFEQANPDRF LYK