| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1113 |
|---|
| Symbol | metG |
|---|
| ID | 6374787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 1196514 |
|---|
| End bp | 1198625 |
|---|
| Gene Length | 2112 bp |
|---|
| Protein Length | 703 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642683614 |
|---|
| Product | methionyl-tRNA synthetase |
|---|
| Protein accession | YP_001959532 |
|---|
| Protein GI | 189500062 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG0073] EMAP domain
[COG0143] Methionyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTAATA ATTTTTCAAG AACACTTGTT ACTACAGCCT TACCATATGC AAACGGCCCG
GTACATCTCG GGCATCTGGC AGGCGTCTAC CTGCCGGCTG ATATCTATGT CCGTTTCAAG
CGAATGCAGG GAGAAAACAT CATACACATT GGCGGTTCAG ACGAACACGG AGTCCCTATA
ACCATTACGG CTGACAAGGA AGGTATTTCC CCGCAGGATG TTGTTGATCG CTATCATAGC
CGGAATATGG ACGCTTTCGA GCGTTGCGGC ATTTCATTTG ATCACTATGG CAGAACAACC
TCGCCTGTTC ATTTCAGGAC AGCACAGGAG TTTTTTTCCG AGATCGAGCG CAAAAATATT
TTCGTCAAGA AAAAAGAACG TCATTTTTAT GATCCTGAAG CACGCCGGTA TCTTTCAGAC
CGTTATGTGG TGGGGACCTG CCCGGTTTGC AACAATCCGG AGGCTAATGG AGATCAGTGC
GAACAATGCG GCACGCATCT GAGCCCGCGA GAACTGAGCA ATCCGAGGAG CAAGCTTTCA
GACCGTACAC CGGAACTCCG CGAGACCCTT CACTGGTATT TTCCACTGGG AAGATTTCAG
GATCAGCTCA AGAACTTTGT TGATTCCCAT GACGATGACT GGCGTGCAAA CGTTCTTAAC
TACACCAGGA CCTGGCTTAA CCAGGGGCTG AAGGACAGGG CGATTACAAG AGATCTTCAC
TGGGGGATTC CTGTACCTCT TGATACCGAC GAAGCGCAGG GCAAGGTGCT TTATGTATGG
TTTGATGCTG TTCTTGGCTA CATATCTTTT ACCCGGGAGT GGGCTGAGAA AGAGGGGAAC
CCGGAGTTAT GGCGGGACTA CTGGCAGAGT TCCGAGTGCC GAATCATCAA TTTTATCGGT
AAGGATAACG TTGTTTTCCA TACCCTCATG TTTCCCGCTA TTCTCATGGC ATGGAATGAA
GACAGAGTGG GCGGGAAGTA CTCTCTTGCA GATAATGTTC CGGCATCGGA GTTCATGAAT
TTCGAGGGAA GGAAATTTTC GAAATCCAGG AATTATGCGG TCTACCTCGG GGAATTTCTC
GACAGGTTTC CTGCCGATAC GTTGAGGTAT TCCATAGCGA TGAATTATCC TGAAAGCAAG
GACAGTGATT TCAGCTGGTC TGATTTTCAG AACAGGACAA ACGGCGAACT TGCCGATACG
CTGGGTAATT TCATAAAACG TTCTATTGAT TTTACCAATT CAAAATTTGA TGGTGAACTG
CCATATGCGT GTACCGGTGA GGACTGGGAC GCGCTTGGTA TCGACTGGGC AGACTCTTTT
GAGAAACTCG ATCAGGCCTA TGAGCAGTTT CATTTCAGGG AAGCGGCTTC TCTGACGATG
CAGATAGCCC GTTTGGCAAA CCGTTTTCTC ACGGAATCCG AGCCATGGAA AGTCATGAAA
ACCGACAGGG AAGCGGCCGG AAAAACCATG GCTCTCTCGC TTAACCTCTG CTATACGCTC
GCGTTGGCAT GGTACCCGGT TATCCCTCAT ACGTCGAACA GGATATATGC TTTGCTGGGA
TTTGATCAAT CCCTCGATGA TGCTGTAAAA AAAGGTGATG TCACCTGGCA TATGGCGAGA
TCACCGCAGT TGCAAAAAGG TCACAAGCTG CACAAGAAGT CCGAAATCCT GTTTACAAAG
ATCGAAGACG GGGACATAGC TCCGGAACTT GAAAAGATTG AACGTCTGCT TGAGGAAGTC
AGGAGTCAGG AAAAGGGGGA GTCGAAAGAG GAGCTGAAAA TCAAGCCTGA AATCAGTTTC
GACGACTTTC AGAAGGTTGA TCTTCGCGTT GGAACGGTTA TCGGTTGTGA GAAGGTGAAA
AAAGCCGACA AGCTCCTCAA GCTGCTTGTG AAGGTGGGCT CTGAAAACCG CCAGGTGCTT
GCAGGTATCG CTCAATCCTG TTCTCCGGAG TCGATCATGG GAAAAAATGT GATCCTTGTC
GCAAATCTTG CTGAAAGAAA GATCAGGGGT GAGGTTTCAC AGGGAATGAT TCTGGCCGTT
GAAGGATCTG ACGGTGCTCT CCATCTTGCA GATGTTGAGG GAACAGGAGT AAATGGAAAA
AGTGTTCAAT GA
|
|---|
| Protein sequence | MTNNFSRTLV TTALPYANGP VHLGHLAGVY LPADIYVRFK RMQGENIIHI GGSDEHGVPI
TITADKEGIS PQDVVDRYHS RNMDAFERCG ISFDHYGRTT SPVHFRTAQE FFSEIERKNI
FVKKKERHFY DPEARRYLSD RYVVGTCPVC NNPEANGDQC EQCGTHLSPR ELSNPRSKLS
DRTPELRETL HWYFPLGRFQ DQLKNFVDSH DDDWRANVLN YTRTWLNQGL KDRAITRDLH
WGIPVPLDTD EAQGKVLYVW FDAVLGYISF TREWAEKEGN PELWRDYWQS SECRIINFIG
KDNVVFHTLM FPAILMAWNE DRVGGKYSLA DNVPASEFMN FEGRKFSKSR NYAVYLGEFL
DRFPADTLRY SIAMNYPESK DSDFSWSDFQ NRTNGELADT LGNFIKRSID FTNSKFDGEL
PYACTGEDWD ALGIDWADSF EKLDQAYEQF HFREAASLTM QIARLANRFL TESEPWKVMK
TDREAAGKTM ALSLNLCYTL ALAWYPVIPH TSNRIYALLG FDQSLDDAVK KGDVTWHMAR
SPQLQKGHKL HKKSEILFTK IEDGDIAPEL EKIERLLEEV RSQEKGESKE ELKIKPEISF
DDFQKVDLRV GTVIGCEKVK KADKLLKLLV KVGSENRQVL AGIAQSCSPE SIMGKNVILV
ANLAERKIRG EVSQGMILAV EGSDGALHLA DVEGTGVNGK SVQ
|
|---|
| |