Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1108 |
Symbol | |
ID | 6374782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1192139 |
End bp | 1192672 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642683609 |
Product | hypothetical protein |
Protein accession | YP_001959527 |
Protein GI | 189500057 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0742] N6-adenine-specific methylase |
TIGRFAM ID | [TIGR00095] RNA methyltransferase, RsmD family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATAC AGTCAGGCAT ATACAAGGGA AGGAATCTTC AGCGAAGCAC AACCGGTTCT ATTCGTCCCT GCAGCAGCAG GGTGAAAAAG TCTCTGTTCG ATATAGTGTC AGTGCGCATG GAGCTTGCCG GTATACACGT GCTGGATCTT TTCGCCGGCT TTGGTTCTCT TGGATATGAA GCGCTGAGCA GGGGGGCTGA AGAGGCGACA TTTGTTGATA CCAGCGTTCA ATCCCTGAAA TCACTGAAGG AAACTGCGGC AGAACTTGGT ATTGCATCAT CGGTCAGCAT CGTAAAGCGT GACGTCGAGC AGTTCATCAA AACAGAGAAA GGGTCGTATG CTATCATTTT TTGCGATCCT CCCTACAGCT GGCGTGACTA CAGGGCGCTG ATCAGGGATA TATTCAAAAG CGGTCTGCTT GCACAGAACG GTATGCTGCT CATTGAGCAC AGTAACCGGC ACGGTTTTGA GGATGAGAAG CACTATGCTT TTCATAAGGA TTACGGGATG ACGAGAGTTA CATTTTTTTG CTGA
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Protein sequence | MKIQSGIYKG RNLQRSTTGS IRPCSSRVKK SLFDIVSVRM ELAGIHVLDL FAGFGSLGYE ALSRGAEEAT FVDTSVQSLK SLKETAAELG IASSVSIVKR DVEQFIKTEK GSYAIIFCDP PYSWRDYRAL IRDIFKSGLL AQNGMLLIEH SNRHGFEDEK HYAFHKDYGM TRVTFFC
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