Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1105 |
Symbol | |
ID | 6374779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1189549 |
End bp | 1190259 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642683606 |
Product | phosphoribosylaminoimidazole-succinocarboxamide synthase |
Protein accession | YP_001959524 |
Protein GI | 189500054 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase |
TIGRFAM ID | [TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAA CAGAGCTTCT TCACGAGGGA AAGGCAAAGA AAGTATTCCT GACGGATAAT AAAGACCTTG TTATTCAGGA ATTCAAGGAT GATGCCACCG CGTTTAACAA CAAGAAAAAA GGTACGATCG GTAACAAGGG TGTCGTTAAC AATGCGATAT CCTGCAAGCT GTTTACCTAC CTTGCTGAAC ATGGCGTTTC AACCCATTTT GTTGAAAAAC TTTCCGACAG GGACATGCTC TGCAAGCGTC TTGACATTAT CCTGGTGGAA GTGGTCGTTC GAAATACGGC GGCAGGGTCA CTGGTGAGAC GGTACGGTTT TGAGGAAGGC TTCAGGCTTG AAGATCCTAT CATTGAACTC TATTTGAAGG ATGATGATCT TGATGATCCT CTGATGAATG AAAGTCATGC TGTCGCCCTC GGCCTGGCGA ACTATGAAGA ACTCGAGCTG CTCAAAGAGC AGGCGGCTAC GATCAATACG CTCCTGAAAA CGTTTTTTGC CGGGAGAAAA CTGAATCTGG TTGATTTCAA ACTTGAATTC GGACGACATA ACGGTGAAAT TCTGCTTGGT GATGAAATCA GTCCCGACAC CTGCCGGTTC TGGGATCTGG ATACCGGTGA GAAGATGGAC AAGGATCGTT TCCGGTTTGA TCTCGGTGGT GTTGAAGATG CGTATACAGA GGTGCAGCAC CGGGTTCTTG ATTTACCATA G
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Protein sequence | MNKTELLHEG KAKKVFLTDN KDLVIQEFKD DATAFNNKKK GTIGNKGVVN NAISCKLFTY LAEHGVSTHF VEKLSDRDML CKRLDIILVE VVVRNTAAGS LVRRYGFEEG FRLEDPIIEL YLKDDDLDDP LMNESHAVAL GLANYEELEL LKEQAATINT LLKTFFAGRK LNLVDFKLEF GRHNGEILLG DEISPDTCRF WDLDTGEKMD KDRFRFDLGG VEDAYTEVQH RVLDLP
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