Gene Cphamn1_1105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1105 
Symbol 
ID6374779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1189549 
End bp1190259 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content46% 
IMG OID642683606 
Productphosphoribosylaminoimidazole-succinocarboxamide synthase 
Protein accessionYP_001959524 
Protein GI189500054 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase 
TIGRFAM ID[TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAA CAGAGCTTCT TCACGAGGGA AAGGCAAAGA AAGTATTCCT GACGGATAAT 
AAAGACCTTG TTATTCAGGA ATTCAAGGAT GATGCCACCG CGTTTAACAA CAAGAAAAAA
GGTACGATCG GTAACAAGGG TGTCGTTAAC AATGCGATAT CCTGCAAGCT GTTTACCTAC
CTTGCTGAAC ATGGCGTTTC AACCCATTTT GTTGAAAAAC TTTCCGACAG GGACATGCTC
TGCAAGCGTC TTGACATTAT CCTGGTGGAA GTGGTCGTTC GAAATACGGC GGCAGGGTCA
CTGGTGAGAC GGTACGGTTT TGAGGAAGGC TTCAGGCTTG AAGATCCTAT CATTGAACTC
TATTTGAAGG ATGATGATCT TGATGATCCT CTGATGAATG AAAGTCATGC TGTCGCCCTC
GGCCTGGCGA ACTATGAAGA ACTCGAGCTG CTCAAAGAGC AGGCGGCTAC GATCAATACG
CTCCTGAAAA CGTTTTTTGC CGGGAGAAAA CTGAATCTGG TTGATTTCAA ACTTGAATTC
GGACGACATA ACGGTGAAAT TCTGCTTGGT GATGAAATCA GTCCCGACAC CTGCCGGTTC
TGGGATCTGG ATACCGGTGA GAAGATGGAC AAGGATCGTT TCCGGTTTGA TCTCGGTGGT
GTTGAAGATG CGTATACAGA GGTGCAGCAC CGGGTTCTTG ATTTACCATA G
 
Protein sequence
MNKTELLHEG KAKKVFLTDN KDLVIQEFKD DATAFNNKKK GTIGNKGVVN NAISCKLFTY 
LAEHGVSTHF VEKLSDRDML CKRLDIILVE VVVRNTAAGS LVRRYGFEEG FRLEDPIIEL
YLKDDDLDDP LMNESHAVAL GLANYEELEL LKEQAATINT LLKTFFAGRK LNLVDFKLEF
GRHNGEILLG DEISPDTCRF WDLDTGEKMD KDRFRFDLGG VEDAYTEVQH RVLDLP