Gene Cphamn1_1097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1097 
Symbol 
ID6374771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1182216 
End bp1182758 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content45% 
IMG OID642683598 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_001959516 
Protein GI189500046 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.734552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAGGT CATTCAATAA ATTGCGGGGT GATGAAATGT CCCGTTTAAG TGTTGAAGAA 
TACTCCAGGA AACAGAAGCA TCCTGTAACG GTGTTGCTGC ATAATATTCG CAGTATGTAT
AATGTGGGGT CTGTTTTTCG TACAGCGGAT GCAGCCGGGA TTGATCGATT GATCATTACC
GGTTATACCG CGACCCCTCC GAGAAAGGAG ATAGATAAAA CCGCACTGGG AGCACAGGAG
AGCGTTGACT GGGAGTATTA TACACATCCT GAAGAGATTC TGGGTGTTCT CAAGGATTCG
GGTGTGACTA TCTGCGGTCT GGAGATCACA GAAAACAGCC GTCCGTATAC TGATATTAAG
AAAGATGATT TTCCGCTCTG CCTCATTCTC GGTAATGAAG TTGATGGAAT CGATGATGAT
GTGCTTCAGT TTTGTGATCA TGTTTTTGAG ATCCCTCAAT ATGGAACCAA GCACTCCCTG
AACGTATCGG TTGCCGCGGG GGTGGCGCTC TATGAAATGG TGAAAACCTT TACTAATCAA
TAA
 
Protein sequence
MRRSFNKLRG DEMSRLSVEE YSRKQKHPVT VLLHNIRSMY NVGSVFRTAD AAGIDRLIIT 
GYTATPPRKE IDKTALGAQE SVDWEYYTHP EEILGVLKDS GVTICGLEIT ENSRPYTDIK
KDDFPLCLIL GNEVDGIDDD VLQFCDHVFE IPQYGTKHSL NVSVAAGVAL YEMVKTFTNQ