Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1097 |
Symbol | |
ID | 6374771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1182216 |
End bp | 1182758 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642683598 |
Product | tRNA/rRNA methyltransferase (SpoU) |
Protein accession | YP_001959516 |
Protein GI | 189500046 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.734552 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAGGT CATTCAATAA ATTGCGGGGT GATGAAATGT CCCGTTTAAG TGTTGAAGAA TACTCCAGGA AACAGAAGCA TCCTGTAACG GTGTTGCTGC ATAATATTCG CAGTATGTAT AATGTGGGGT CTGTTTTTCG TACAGCGGAT GCAGCCGGGA TTGATCGATT GATCATTACC GGTTATACCG CGACCCCTCC GAGAAAGGAG ATAGATAAAA CCGCACTGGG AGCACAGGAG AGCGTTGACT GGGAGTATTA TACACATCCT GAAGAGATTC TGGGTGTTCT CAAGGATTCG GGTGTGACTA TCTGCGGTCT GGAGATCACA GAAAACAGCC GTCCGTATAC TGATATTAAG AAAGATGATT TTCCGCTCTG CCTCATTCTC GGTAATGAAG TTGATGGAAT CGATGATGAT GTGCTTCAGT TTTGTGATCA TGTTTTTGAG ATCCCTCAAT ATGGAACCAA GCACTCCCTG AACGTATCGG TTGCCGCGGG GGTGGCGCTC TATGAAATGG TGAAAACCTT TACTAATCAA TAA
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Protein sequence | MRRSFNKLRG DEMSRLSVEE YSRKQKHPVT VLLHNIRSMY NVGSVFRTAD AAGIDRLIIT GYTATPPRKE IDKTALGAQE SVDWEYYTHP EEILGVLKDS GVTICGLEIT ENSRPYTDIK KDDFPLCLIL GNEVDGIDDD VLQFCDHVFE IPQYGTKHSL NVSVAAGVAL YEMVKTFTNQ
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