Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1094 |
Symbol | |
ID | 6374768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 1179119 |
End bp | 1180108 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642683595 |
Product | ADP-L-glycero-D-manno-heptose-6-epimerase |
Protein accession | YP_001959513 |
Protein GI | 189500043 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0490023 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAGTCG TCACTGGAGG AGCTGGATTT ATTGGCAGTG CGATGCTTTG GGAACTCAAC AGGCACGGAA GAGATGATAT CCTTGTCGTC GATAACCTCG GCAGCACAAC TACCGGAAAA TGGAAAAATC TTTCCGGGCT TTCGTTCACT GATTTCATCC ATAAAAATGA TTTTCTTTCA AGCCTGGAGA GCGGTCATTT CCCTGAAATA GACGCAGTTA TTCACATGGG GGCCATCAGC GCGACTACGG AAACCGATGC GAACCTCCTG ATGACAAATA ATTATCACTA TTCACAACAA CTCGCGAGCT ACTGCGCCTC CCGGAGCATT CGTTTTATCT ACGCGTCAAG TGCCGCCACA TACGGAAGCG GAACTGCCGG ATACAGCGAC GAAAAAACGG AGACACAATC ACTCAGACCG CTCAACATGT ATGGATACTC TAAACAGCTG TTTGATTTGT GGATGCTCAA AAAAGGACTT CTGCGAACAT CTGCCGGGCT GAAGTTCTTT AATGTTTACG GCCCGAACGA GTACCATAAA GATGACATGA GCAGTGTTGT CTTCAAGGCC TTTCATCAGA TACAGGAAAA TGGGAAGGTC AAGCTCTTTC AATCTCACCG GAAAGATTTT GAACATGGTG AGCAGATGAG AGACTTCATC TACATCAAGG ATTGCACGGC GATTATGCTG TGGCTGCTTG AAAATCCATC GATAAACGGA ATTTTCAATG TCGGAACGGG AAAAGCCAGG AGCTTCAAAG ATCTCGTCAC GGCAACATTT TCCGCTCTTG AACTTGATCC GGAAATCAGC TATATCCCTA TGCCCGAACA CCTTCGTGAC AAATATCAGT ATTTCACACA GGCTGAAATG AACAGGTTGA GAGCGTCTGG ATACACCACA CCTCTGACCT CTCTTGAAGA TGGCGTCAGG GATTATGTGT GCAACTACCT TGACAGTTCC GTCCCATACC TCGAACACGA TGTTCAGTAA
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Protein sequence | MIVVTGGAGF IGSAMLWELN RHGRDDILVV DNLGSTTTGK WKNLSGLSFT DFIHKNDFLS SLESGHFPEI DAVIHMGAIS ATTETDANLL MTNNYHYSQQ LASYCASRSI RFIYASSAAT YGSGTAGYSD EKTETQSLRP LNMYGYSKQL FDLWMLKKGL LRTSAGLKFF NVYGPNEYHK DDMSSVVFKA FHQIQENGKV KLFQSHRKDF EHGEQMRDFI YIKDCTAIML WLLENPSING IFNVGTGKAR SFKDLVTATF SALELDPEIS YIPMPEHLRD KYQYFTQAEM NRLRASGYTT PLTSLEDGVR DYVCNYLDSS VPYLEHDVQ
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