| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1081 |
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| Symbol | |
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| ID | 6374755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 1169862 |
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| End bp | 1170434 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642683582 |
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| Product | surface antigen msp4 family protein |
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| Protein accession | YP_001959500 |
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| Protein GI | 189500030 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000433571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.412873 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACATAT GGAAAACAGC TCTTGCCGGA ACGATGCTCA TAATCGGCAC AACGGCCACA
GCTTGTGCGG CAACCCCTTA CGTCAGCGGT TCGGCAGGCA TCGCCATGCT TGAAGATTCC
GATCTGGGAA GCGGGTTTAC CTGGCCCTAT GATACCGGAT TGGCTTTAGC GGTTGCTGCA
GGCCTCGATA TGGGAAACCT GCGACTTGAA GCTGAAGTTG GCTATCAGGA TAACGGTATC
GAGGAGAGTG ACGATCTTGA GATCAACATC ACCACCTTCA TGGCGAACGG CTATTACGAT
CTCGAACTCC CCTTGAATCC TGTAAAGCCT TACGTTACGG CAGGAATAGG CGTTGCTGAC
GTCAATGCCA AAGGATTTTC ATTTGATGAC GACAGCAGCC TGGTGCTCGC CGGCCAGATC
GGTGTGGGTG CCGGATTTGC CGTTGCGCCC ATGGTCAACC TCGATGCGCG ATATCGCTAC
CTGATGACGA CAGACGCTGA ATTCGACGGA GATCCCGACA AGATCGGCAT AGACAGCCAT
AACGTCATGC TCGGACTCCG GATCGGACTC TGA
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| Protein sequence | MNIWKTALAG TMLIIGTTAT ACAATPYVSG SAGIAMLEDS DLGSGFTWPY DTGLALAVAA
GLDMGNLRLE AEVGYQDNGI EESDDLEINI TTFMANGYYD LELPLNPVKP YVTAGIGVAD
VNAKGFSFDD DSSLVLAGQI GVGAGFAVAP MVNLDARYRY LMTTDAEFDG DPDKIGIDSH
NVMLGLRIGL
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