Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1074 |
Symbol | |
ID | 6374748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1163466 |
End bp | 1164338 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642683576 |
Product | bifunctional methionine sulfoxide reductase B/A protein |
Protein accession | YP_001959494 |
Protein GI | 189500024 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0225] Peptide methionine sulfoxide reductase [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase [TIGR00401] methionine-S-sulfoxide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.150289 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATACA AAAGTTTGTC TTCGGAAGAA GAAAGGGTCA TTGTGAAAAA AGGAACTGAA ATGCCGTTTT CTGGTAAATA TTTCAATCAC AAGGAAGATG GGACCTATAC CTGCAAGCGC TGTGACGCGC CTCTTTTTCG CTCGTCGGAC AAGTTCGATT CCGGCACAGG TTGGCCGAGT TTTGATGATG AGATTCCCGG GGCGGTAAAA AAAGAGACCG ACGCTGACGG GAGAAGGACC GAGATTATCT GCGCGAACTG CGGCGCTCAT CTCGGACATG TTTTCTACAA CGAGGGTATG ACCGACAAGA ATGCCCGGTA TTGCGTCAAC TCAATCTCAC TGGATTTCAA AGATGAAGGG GCTTCTGATG CTGACGCTGT AGGAATAACT CAAAAAGCTG TTTTTGCCGG TGGGTGTTTC TGGGGTGTGG AATATCATTT TCAAAAAGTA GCAGGGGTGA AATCCGTAAC GTCAGGATAT ACCGGCGGCA GCAAGACTGA TCCAACGTAT AAGGAAGTTT GTACAGGAAC AACCGGGCAT GCAGAGGCTG TAGAGGTTGA ATATGATCCG TCACAAACCT CATACGAGGA GCTTGCCAAA CTGTTTTTTG AAATTCATGA CCCGACCCAG TTGAACCGTC AGGGGCCTGA TAGGGGAACG CAATACCGTT CAGCTGTTTT CTATGCGGAC GAAGAACAGA AAAATATTGC GCAAAAACTG ATCGCCGAAC TGAAATCAAA CGGTTATAAG GTGGTTACCG AACTTGAACC TGCTTCAGAA TTTTACCCGG CGGAAGACTA TCATCAGGAC TATTATGAAA AGACCGGCCA TCAGCCTTAC TGTCACATCT ATGAGAAAAG GTTCGATAAG TAA
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Protein sequence | MQYKSLSSEE ERVIVKKGTE MPFSGKYFNH KEDGTYTCKR CDAPLFRSSD KFDSGTGWPS FDDEIPGAVK KETDADGRRT EIICANCGAH LGHVFYNEGM TDKNARYCVN SISLDFKDEG ASDADAVGIT QKAVFAGGCF WGVEYHFQKV AGVKSVTSGY TGGSKTDPTY KEVCTGTTGH AEAVEVEYDP SQTSYEELAK LFFEIHDPTQ LNRQGPDRGT QYRSAVFYAD EEQKNIAQKL IAELKSNGYK VVTELEPASE FYPAEDYHQD YYEKTGHQPY CHIYEKRFDK
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