Gene Cphamn1_1074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1074 
Symbol 
ID6374748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1163466 
End bp1164338 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content47% 
IMG OID642683576 
Productbifunctional methionine sulfoxide reductase B/A protein 
Protein accessionYP_001959494 
Protein GI189500024 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase
[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase
[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.150289 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATACA AAAGTTTGTC TTCGGAAGAA GAAAGGGTCA TTGTGAAAAA AGGAACTGAA 
ATGCCGTTTT CTGGTAAATA TTTCAATCAC AAGGAAGATG GGACCTATAC CTGCAAGCGC
TGTGACGCGC CTCTTTTTCG CTCGTCGGAC AAGTTCGATT CCGGCACAGG TTGGCCGAGT
TTTGATGATG AGATTCCCGG GGCGGTAAAA AAAGAGACCG ACGCTGACGG GAGAAGGACC
GAGATTATCT GCGCGAACTG CGGCGCTCAT CTCGGACATG TTTTCTACAA CGAGGGTATG
ACCGACAAGA ATGCCCGGTA TTGCGTCAAC TCAATCTCAC TGGATTTCAA AGATGAAGGG
GCTTCTGATG CTGACGCTGT AGGAATAACT CAAAAAGCTG TTTTTGCCGG TGGGTGTTTC
TGGGGTGTGG AATATCATTT TCAAAAAGTA GCAGGGGTGA AATCCGTAAC GTCAGGATAT
ACCGGCGGCA GCAAGACTGA TCCAACGTAT AAGGAAGTTT GTACAGGAAC AACCGGGCAT
GCAGAGGCTG TAGAGGTTGA ATATGATCCG TCACAAACCT CATACGAGGA GCTTGCCAAA
CTGTTTTTTG AAATTCATGA CCCGACCCAG TTGAACCGTC AGGGGCCTGA TAGGGGAACG
CAATACCGTT CAGCTGTTTT CTATGCGGAC GAAGAACAGA AAAATATTGC GCAAAAACTG
ATCGCCGAAC TGAAATCAAA CGGTTATAAG GTGGTTACCG AACTTGAACC TGCTTCAGAA
TTTTACCCGG CGGAAGACTA TCATCAGGAC TATTATGAAA AGACCGGCCA TCAGCCTTAC
TGTCACATCT ATGAGAAAAG GTTCGATAAG TAA
 
Protein sequence
MQYKSLSSEE ERVIVKKGTE MPFSGKYFNH KEDGTYTCKR CDAPLFRSSD KFDSGTGWPS 
FDDEIPGAVK KETDADGRRT EIICANCGAH LGHVFYNEGM TDKNARYCVN SISLDFKDEG
ASDADAVGIT QKAVFAGGCF WGVEYHFQKV AGVKSVTSGY TGGSKTDPTY KEVCTGTTGH
AEAVEVEYDP SQTSYEELAK LFFEIHDPTQ LNRQGPDRGT QYRSAVFYAD EEQKNIAQKL
IAELKSNGYK VVTELEPASE FYPAEDYHQD YYEKTGHQPY CHIYEKRFDK