| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1069 |
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| Symbol | |
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| ID | 6374743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 1158898 |
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| End bp | 1160358 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642683571 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_001959489 |
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| Protein GI | 189500019 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0125737 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGCAGT CAAATAACAA AGAAAGAACC CTTGAAATGA AAAACAGAAC GAGAGTACCG
GGGGTTGTCC TGATTCCCAT GTTTTTTCTG ATGCTCTCTG CGTGCAGTAC GGTCGGAAAA
TATACACAGC CTGAAACGGG CTTGCCCGGA ACATACAGAG GGAGTGTTAC GGCTGATTCA
GGAGTGGCAG CAGTGCCCTT TGCGGGAACT GTTCCCTACA GGACTTTTTT TGCTGACAAG
TCGCTTCTTG GGTTGATCGA TGCAGCTCTT GAAAACAATC ACGATCTGCA GGTAGCCATA
AAGAATATCG AATACGCATC ACTTGGCTTG AAGCAGGCAA AATTGGGCAA TCTTCCAGGA
CTGAACCTGC AGGGAAGCGT CAGCGGGGCA ACTACCTCCG ATTTCGGATC GACTCCGTTT
TCTTCCGGGA AGGAGAGTGT CGAAGAGTAC AGCGCATCAC TTTCACTTTC CTGGGAAGCC
GATATCTGGG GCAAGATCCG CAACACAAGA AAAGCGGCGC TTGCCGAGTA CCTCCGGTCA
GTTGAAGCTG AAAAAGCGGT TCACACGAGG CTGATTGCCG ATGTTGCTCG AGGCTATTAT
AACCTGTTGC TGCTCGACGT GCAGCTCGAT ATAACAAGAC GTAATCGGGC GCTTGCCGAT
ACCACGCTTT CAATGATGCG GCTGCAGTAC GATGCAGGTT ACGTTACTTC GCTGGCGGTA
GAACAGCAGG AAGCTGTTAA GCTGGGGATA GAAGCCGGTA TAGCCGGAAT CGAGCAGGGG
ATTGCCGTTC AGGAAAACGC ACTGAGCGTT CTCTGCGGCA GGATGCCGGA TGAGATAGTC
CGTACCGCAA GACTTACTGA TCTGTCGATA GAGAACACGT TTTCAACGGG CATACCTGCG
CAACTGTTGA GTAACCGTCC GGATGTCAAG TCGGCGGAGA TGGCTCTCAT GAAAGCTCAC
GCAGAGAGCG GAGTTGCAGG CTCAAGGCTC TATCCTTCGT TCACGATCAG TGCCGAAGCC
GGTTCCAATG CCCTGACTTC CAGTGACTGG TTTACTTTTC CCGGTTCGTT GTTCTCGTTT
GTTCATGGCG CAGTCCTTCA GCCGCTTTTT CAGCAGGGAA AGCTCAGAAC CGCCTACAAG
CAATCCGGAG TTGTTCGTGA CAGGGAGGAG ATTCTTTTCA GGCAGGCGGT GCTCAACGCA
GTCAGGGAGG TTTCCGATGC GCTGGTGGCC ATTCAGAAAC TGGATATTCA GGAGAAGGCT
CTTGAAAAAC AGGAGCGTGT TCTTACTCAG TCGGTTGAAC ACGCGAACCT ACTTTTCAAC
AGCGGCATGG CCGATTACCT GGAGGTGATC ACAGCCCAGA AAAACGCTCT TGATTCCGGG
ATTTCACTTG CCGATATCCG TCGTCAGCGC CTCGATGCCC AAACAGAGCT TTACAGGGCA
CTGGGCGGAG GATGGAGGTA A
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| Protein sequence | MVQSNNKERT LEMKNRTRVP GVVLIPMFFL MLSACSTVGK YTQPETGLPG TYRGSVTADS
GVAAVPFAGT VPYRTFFADK SLLGLIDAAL ENNHDLQVAI KNIEYASLGL KQAKLGNLPG
LNLQGSVSGA TTSDFGSTPF SSGKESVEEY SASLSLSWEA DIWGKIRNTR KAALAEYLRS
VEAEKAVHTR LIADVARGYY NLLLLDVQLD ITRRNRALAD TTLSMMRLQY DAGYVTSLAV
EQQEAVKLGI EAGIAGIEQG IAVQENALSV LCGRMPDEIV RTARLTDLSI ENTFSTGIPA
QLLSNRPDVK SAEMALMKAH AESGVAGSRL YPSFTISAEA GSNALTSSDW FTFPGSLFSF
VHGAVLQPLF QQGKLRTAYK QSGVVRDREE ILFRQAVLNA VREVSDALVA IQKLDIQEKA
LEKQERVLTQ SVEHANLLFN SGMADYLEVI TAQKNALDSG ISLADIRRQR LDAQTELYRA
LGGGWR
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