Gene Cphamn1_1054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1054 
Symbol 
ID6374728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1143027 
End bp1143299 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content44% 
IMG OID642683558 
Producthypothetical protein 
Protein accessionYP_001959476 
Protein GI189500006 
COG category[R] General function prediction only 
COG ID[COG1569] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00240358 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGATTG TCTGCGACAG TAACATCCTC ATTTCCGGAA TTCTTTTCGG AGGAAAACCG 
CGTGAAATCC TGCACCTCTG CTCTTCAGGG AGTGTTGTAA ATAGTATCTC AACTGATATT
CTGAAAGAAG TCGAAGAGGT TTTACTTCGA CCGAAATTCG ACCTTAATGA AAAGCGGGTA
TACGAAATTA TCCGATTGTT CAGAGATACC TTCAAGCTCG TCAACCCTGA AAAGCGCCTT
TCGGTCGTCA CTGCCGATCC CCTTTCCATC TAA
 
Protein sequence
MKIVCDSNIL ISGILFGGKP REILHLCSSG SVVNSISTDI LKEVEEVLLR PKFDLNEKRV 
YEIIRLFRDT FKLVNPEKRL SVVTADPLSI