Gene Cphamn1_1021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1021 
Symbol 
ID6374690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1099649 
End bp1100872 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content51% 
IMG OID642683520 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001959443 
Protein GI189499973 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGCC CTCTCTTTGT ACCGGCAAAC ATTGCAGGCA TAACGCTTCA GAACAGGATC 
ATCCGTTCCG CCACGCATGA AAGCATGGCC GACGAAGCGG GTGCGCCGAC CGAAGCGCTT
GAAAAACTGT ACGTCAAAGT AGCCAAAGGA GGTGCGGGGG CAATAATCAC AGGATATGCC
GGTATACAAC AGGATGGGAA AAGCAGTCTC TTAAACATGC TGATGATCAA CCGCGACGAG
CTTATCCCCT CCTACCGGAA ACTCACAGAC ACAGTACATG AACACGACGT TCCGGTTATT
CTCCAGATCG CCCACTGCGG ACGCCAGACC AGATCGGCCG TGACCGGTCT TCGGACTGTC
GCCCCCTCCC CGCTGAAAGA TTTCATCTTC AACGAGGAAA CACCTCATGC ACTCGAAGAA
CATGAAATCG AAACCATCAT CGACAACTTT GTCACTGCCG CTGAAAGGGC AAAAAAAGCC
GGGTTCGACG GAATTCAGCT TCATCTCGCC CACGGGTACC TGCTGGCGCA ATTCCTTTCG
GGATACACGA ACCGTCGTAA AGACCGCTGG GGCGGATCGA CAGAGAACAG GTTCAGGATT
GTCTCGGAAA TTATGGATCG CATCCGGAAA CGACAAGACA ACTTTCCTGT TCTTGCCAAA
ATAAACGCCT ATGACAGCAG ACCGGGAGGT ATGCGGATCG AGGAAGCAGT CAAAATCTCC
CGACTGCTCG AATCATCGGG ATGCGATGCC ATAGAAGTAT CTTCAGGGGT TGTCGAAGAA
GGGCTTTCAA TCATGAGAGG ACCTGAACCA CCTGTCAAAG CGCTGTTTCA GAGCAGCTTC
AGGTTCAGCA CAATGCCTGC AATGCTGAAG AAACTCTCCG CTCCGTTCAT TACATTCGCC
ATGCGCTCTC CAAAGCCATA TCGGGCCTAT AATCTTGAAG CAGCGAATGC AATCAAGCAG
GCGGTATCCA TTCCGGTCAT CACTGTCGGT GGACTGCACG AACTGACGAA CATTGCCTCA
GCCCTCGAAA GCGGATCAAC CGACTTCATC TCAATGTCCC GCCCGTTCAT CATAGAACCT
GATATCGTCA GGAAATTCAG TGAGGGAAAA CAAACAACAT CACGCTGCAT CATGTGCAAT
TACTGTGCAC TGATGATCGA GTCGGGCAAC GTCACCTGTT ATTATGGAAA ACTTCCCGCC
TGTTCAGAAA ACAAATCCCG CTGA
 
Protein sequence
MTRPLFVPAN IAGITLQNRI IRSATHESMA DEAGAPTEAL EKLYVKVAKG GAGAIITGYA 
GIQQDGKSSL LNMLMINRDE LIPSYRKLTD TVHEHDVPVI LQIAHCGRQT RSAVTGLRTV
APSPLKDFIF NEETPHALEE HEIETIIDNF VTAAERAKKA GFDGIQLHLA HGYLLAQFLS
GYTNRRKDRW GGSTENRFRI VSEIMDRIRK RQDNFPVLAK INAYDSRPGG MRIEEAVKIS
RLLESSGCDA IEVSSGVVEE GLSIMRGPEP PVKALFQSSF RFSTMPAMLK KLSAPFITFA
MRSPKPYRAY NLEAANAIKQ AVSIPVITVG GLHELTNIAS ALESGSTDFI SMSRPFIIEP
DIVRKFSEGK QTTSRCIMCN YCALMIESGN VTCYYGKLPA CSENKSR