Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1007 |
Symbol | |
ID | 6374676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1080781 |
End bp | 1081599 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642683507 |
Product | biotin/lipoate A/B protein ligase |
Protein accession | YP_001959430 |
Protein GI | 189499960 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0095] Lipoate-protein ligase A |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.235088 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTTAG TCTCTTTTTC CGGACCTGTA TTCGTTGTTT CCACTCCTGA GCGTAGCGGG GAATGGAACA TGGCTTTTGA CAGGAGCCTG CTGGAGCTTT TCACGAAAGG TGCATTTCAA CAACGATTCG GCAGCGGGAG CATGCTCTGG CGTTTTTATT CCTGGAGCCC TTCGGCGGTT TCTCTTGGTT ATTCTCAGAG TATCGAAGAG ATTGACCGGG AGCAGTGCCG GAGGAGAAAT ATCGATATTG TCAGAAGACC GACAGGAGGC AGGGCTGTTC TGCATAGTGA TGAATTCACC TATTCACTGC TGGCTGATAC CGGTCACAAG AGCGCAGAAA TCTACGCGGT AGTTCATGAA ATTATTCGTC AGGCGTTGCT GACATTGGGC GTTGAGGCAG AATTCTGCCG TACAACTCCT GATATGAGAA AGCGGTACGG CGCAGCAGAA TCGGTAAGCT GTTTTACCGC TTCAGCAAGA AACGAGCTGC ATGTCGATGG TCGAAAACTT GTCGGTTCGG CACAAAGGCG CTCGGATAAC GTTATTCTTC AGCACGGCTC TCTGCTTCTT TCCGACAGAC ATAAAATGCT GCGGGATCTG CTGAAGTGCA GCGATGGAGG GGTCTTGTCG AAAGTCAGCG GTGATCTGGA CCGCAAGACA ATATCGGTTA GTGAGTTGAC AGGCGCTATT CCTGATTTTA CCTTGATAGC AGGTGCCATG ACAGCCGCGA TATCGCAACT GTTCGGTGTT GATGTCACGT TTCTCGAAGA GCATGACCTG ACCTCCCTTG ATTCTTCTCT CCAGGCCGTT CCTCTCTGA
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Protein sequence | MQLVSFSGPV FVVSTPERSG EWNMAFDRSL LELFTKGAFQ QRFGSGSMLW RFYSWSPSAV SLGYSQSIEE IDREQCRRRN IDIVRRPTGG RAVLHSDEFT YSLLADTGHK SAEIYAVVHE IIRQALLTLG VEAEFCRTTP DMRKRYGAAE SVSCFTASAR NELHVDGRKL VGSAQRRSDN VILQHGSLLL SDRHKMLRDL LKCSDGGVLS KVSGDLDRKT ISVSELTGAI PDFTLIAGAM TAAISQLFGV DVTFLEEHDL TSLDSSLQAV PL
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