Gene Cphamn1_1007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1007 
Symbol 
ID6374676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1080781 
End bp1081599 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content51% 
IMG OID642683507 
Productbiotin/lipoate A/B protein ligase 
Protein accessionYP_001959430 
Protein GI189499960 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0095] Lipoate-protein ligase A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.235088 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTAG TCTCTTTTTC CGGACCTGTA TTCGTTGTTT CCACTCCTGA GCGTAGCGGG 
GAATGGAACA TGGCTTTTGA CAGGAGCCTG CTGGAGCTTT TCACGAAAGG TGCATTTCAA
CAACGATTCG GCAGCGGGAG CATGCTCTGG CGTTTTTATT CCTGGAGCCC TTCGGCGGTT
TCTCTTGGTT ATTCTCAGAG TATCGAAGAG ATTGACCGGG AGCAGTGCCG GAGGAGAAAT
ATCGATATTG TCAGAAGACC GACAGGAGGC AGGGCTGTTC TGCATAGTGA TGAATTCACC
TATTCACTGC TGGCTGATAC CGGTCACAAG AGCGCAGAAA TCTACGCGGT AGTTCATGAA
ATTATTCGTC AGGCGTTGCT GACATTGGGC GTTGAGGCAG AATTCTGCCG TACAACTCCT
GATATGAGAA AGCGGTACGG CGCAGCAGAA TCGGTAAGCT GTTTTACCGC TTCAGCAAGA
AACGAGCTGC ATGTCGATGG TCGAAAACTT GTCGGTTCGG CACAAAGGCG CTCGGATAAC
GTTATTCTTC AGCACGGCTC TCTGCTTCTT TCCGACAGAC ATAAAATGCT GCGGGATCTG
CTGAAGTGCA GCGATGGAGG GGTCTTGTCG AAAGTCAGCG GTGATCTGGA CCGCAAGACA
ATATCGGTTA GTGAGTTGAC AGGCGCTATT CCTGATTTTA CCTTGATAGC AGGTGCCATG
ACAGCCGCGA TATCGCAACT GTTCGGTGTT GATGTCACGT TTCTCGAAGA GCATGACCTG
ACCTCCCTTG ATTCTTCTCT CCAGGCCGTT CCTCTCTGA
 
Protein sequence
MQLVSFSGPV FVVSTPERSG EWNMAFDRSL LELFTKGAFQ QRFGSGSMLW RFYSWSPSAV 
SLGYSQSIEE IDREQCRRRN IDIVRRPTGG RAVLHSDEFT YSLLADTGHK SAEIYAVVHE
IIRQALLTLG VEAEFCRTTP DMRKRYGAAE SVSCFTASAR NELHVDGRKL VGSAQRRSDN
VILQHGSLLL SDRHKMLRDL LKCSDGGVLS KVSGDLDRKT ISVSELTGAI PDFTLIAGAM
TAAISQLFGV DVTFLEEHDL TSLDSSLQAV PL