Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0997 |
Symbol | |
ID | 6374666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 1070792 |
End bp | 1071274 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642683498 |
Product | membrane protein |
Protein accession | YP_001959421 |
Protein GI | 189499951 |
COG category | [S] Function unknown |
COG ID | [COG3431] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000840756 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGAAGAAA ATAACAGCAA AAGGCCCATC CAATATCACG AGGAGCTGCC CTCAGTCCAT GACGACATGC TTATTTCATA TCTTCACAAA GTGATTCGGT TTGCCGTCAA GATTCTTGCC GTCCTCATGG TACTGGTAAT AATATGGGGA ATAGGCGATG TCATTCATGT TCTCTACACA CGCCTGAATC AACCACCCTA TCTGCTCCTC AGCATCAATG ACCTGCTGGA AACATTCGGT GCCTTTTTGG CCGTCCTTAT CGCTATTGAA ATATTCATCA ATATCAGGCT CTATCTCGGA ACAAATATCG TTCCGGTGAA ACTGGTCGTC GCGACAGCCC TGATGGCTAT CTCCCGTAAA GTAATTATCC TTGACCTTGA CAAGCTTACA CCGGACTATC TGCTCGGCAT AGGTGCTGTC GTGCTTGGCC TCGGCATTTC CTACTGGCTG ATAACCCGCG AAAAACCTGA CATTCTCCGC TGA
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Protein sequence | MEENNSKRPI QYHEELPSVH DDMLISYLHK VIRFAVKILA VLMVLVIIWG IGDVIHVLYT RLNQPPYLLL SINDLLETFG AFLAVLIAIE IFINIRLYLG TNIVPVKLVV ATALMAISRK VIILDLDKLT PDYLLGIGAV VLGLGISYWL ITREKPDILR
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