Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0996 |
Symbol | |
ID | 6374665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1069834 |
End bp | 1070787 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642683497 |
Product | hypothetical protein |
Protein accession | YP_001959420 |
Protein GI | 189499950 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.527408 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000950481 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGATTCATT CCAGGGATAC ATGGGAAGCA ATTGCTGAAT CTTTTCTGCC CCCTTGTAAA GAGGTGGTGC AGAGAAATCG TGCGATTACA GCGCAGTATG CGCAACTCTA TCTCAAGCAT CATGAGATAT ACAAATGGGC GGGTATGGCA GCTTTCGCGT CGAGCCAGGT TGGCGTTGCT CTCGCCTTTG CAGAAATGAT GCAGACTCCC GGAAGGATGA TGGAGACGGA GCACCACGAA AAGCCGGGTG ATATGTTACA GGGCATAGGG GATTTTCTTG CTGGAGCAAC CCGTGGTGTG TTTTCTCTCC CTTTCATGCT GTTCGATGTT GCCGCTAAAA ACATTCTGCT CAATGATCTT GAGGAGATAC GAAAAGGCAA TAACGCTATC TACAACGATA TCGCATGGGC TCATATGGCC TACACAAAAG GCGGACTTGC CGAGATAGAA GGCAATATTT CCGATAATGA AAGGGAGTTT CTGTTATCAG GTTTTCGTCA GATCGATGAA GGTGCTGCTC TTATGAAAAC GGGGGAAGAT CACCAAAAGG CATCTGCATT GATCAGGGAG GGGAATAGCA GGCTGTTGAG GCATGAACAG GTCAATACTC TCGGTCCTGT TTTCCAGGCG ATAAGCCCAC AGGGGCATAT TGTCGTATCG TTCGGCAGTG AACTCAATTT TGGAGAAGCC GCTTCTCCGG GGCATCGTTC AAGGGCTTCA TTCGCCGATC ATTTCGGCTA TTTCGAAGTG CTTTCAGGAT GCAGGGATGT CACCGAGACG CAACACCGGT GGCAGTGGAT AGAGGAAAAC GTTCTGCCTG TATGGTATGC TGTCGACGAT GGATTCGGCA GATGGTCCGG AACGGAAAGA GTTTTCAGGT CAATGGCAGA GGGGGAAGCC AACATGCTCC AGCAGATTGC GCATTTTGCT TCGACAATGT CATTTCTCCG CTGA
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Protein sequence | MIHSRDTWEA IAESFLPPCK EVVQRNRAIT AQYAQLYLKH HEIYKWAGMA AFASSQVGVA LAFAEMMQTP GRMMETEHHE KPGDMLQGIG DFLAGATRGV FSLPFMLFDV AAKNILLNDL EEIRKGNNAI YNDIAWAHMA YTKGGLAEIE GNISDNEREF LLSGFRQIDE GAALMKTGED HQKASALIRE GNSRLLRHEQ VNTLGPVFQA ISPQGHIVVS FGSELNFGEA ASPGHRSRAS FADHFGYFEV LSGCRDVTET QHRWQWIEEN VLPVWYAVDD GFGRWSGTER VFRSMAEGEA NMLQQIAHFA STMSFLR
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