Gene Cphamn1_0991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0991 
Symbol 
ID6374660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1065208 
End bp1066644 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content49% 
IMG OID642683492 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001959415 
Protein GI189499945 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR01386] heavy metal sensor kinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000946283 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000107612 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCGAAAGA ATTCCGGGGA AAAAGACGGC CTGAGATTCG GCAGGGGGAC AAGTATTCGC 
GACAGGCTTG CCGGGCTCTA TCTCGTTGTG ACCGCTTCGC TGATGGTCAT GGTGTTTGTT
CTTGTCTATG TTCTGGTTGA GCATGACGTA TACCGGCATA TCGATGAAGA ACTTGACGAA
GAGGTCGGTG AATTTGTCGA AAGTCTGAGG GTAACGGAAA ACGGACTGTT GTTTGAAGAC
CAGACAGAGT GGATGGAACG TTCTCACATT ACGGTCGATT TCTATCCCAA ATTCGTACAG
GTTGTTGCCG CCGGTGCTTC TCCGGAAATC ATGAAAAAAT CATTCAACCT TTTCAGCGAT
ACTCTCTGCT ACAACCCGGT TCTCGAAAAA GCGGCGTTTT ATAATTCCGC TATCGGTGGA
GCATCCGTCC GCCAGGTTCA GGTGCCTGTT TTTCAAGGAG ACGGGTCAGG TGTTGCCGCA
TGGGTGCTTG TCGCGGTTCC TCTCGATGAA TCACTTTTCG TGCTCCATGA TCTGCGAATA
GCGCTGTTTT TTTCCCTGGC GGTTGTTCTG TTGACCTTGT TTTTTGTGAC CCGTTTTCTT
GCAGGAAAAA GCATTGATCC CATTGAACGG GTTATTGAAA CGGCAGAAAC AATTACCAGG
GAAAACCTCG ACGAAAGAAT AGTGCTTCCT TCGAGGAAAG ATGAGCTCTA TCGTCTCTCG
TTCACGATCA ACAGCCTGCT TGACAGGCTG CAGGATGCCT ATGTCAGGGA AAAGCAGTTT
ACTTCTGACG CTTCCCATGA ACTGAAAACC CCGCTCACTT CAGTGATGGG TACTCTCGAG
GTTCTGATAA GAAAGCCTCG TGATCCCGGT TACTACGAGG CGAGAATCGG TTTCTGTATC
AATGAGCTGA AACGCATGTC AGGATTGATT GAACAGTTAC TCCTGCTTGC CCGATACAAT
GCCGGTTCGT TCAGGCCGGA TATTGAGGTT GTCGATGCAG AACAGATAGT GGAAAAAGTC
CTGGCAAGAG CGGAGGATCT GGTCAAGCAA CAGCAATTGC AGGTGAGCAT CAGGAGTAAA
AAGGAAGTCC TGGTCAGAGC TGACGCATCG ATGCTTGGCG TAATGCTTGA CAACATTGTT
TCCAATGCGG TTAAATATTC CCGGAAAGGA GGGCATGTCT ATGTTGAGCT TGAAAGACGG
GGAGGTTCTG TTTTCTGTTC GGTTACCGAC AGCGGTACCG GAATTCCTCC TGAAAAAATT
GAACGTCTTT TTGAGCGTTT TTACCGGGTT GATGAATCAC GGAATTCACA GATAAGCGGA
ACGGGTCTGG GGCTGGCCCT TGTAAAAAAA CTTGCCGATA TGCAGCACAT TACGGTGGGG
CTTTCAAGCG TTGAGCATGA CGGTACAGTG GTGACCTTCG AAATTCCCGC GGCATGA
 
Protein sequence
MRKNSGEKDG LRFGRGTSIR DRLAGLYLVV TASLMVMVFV LVYVLVEHDV YRHIDEELDE 
EVGEFVESLR VTENGLLFED QTEWMERSHI TVDFYPKFVQ VVAAGASPEI MKKSFNLFSD
TLCYNPVLEK AAFYNSAIGG ASVRQVQVPV FQGDGSGVAA WVLVAVPLDE SLFVLHDLRI
ALFFSLAVVL LTLFFVTRFL AGKSIDPIER VIETAETITR ENLDERIVLP SRKDELYRLS
FTINSLLDRL QDAYVREKQF TSDASHELKT PLTSVMGTLE VLIRKPRDPG YYEARIGFCI
NELKRMSGLI EQLLLLARYN AGSFRPDIEV VDAEQIVEKV LARAEDLVKQ QQLQVSIRSK
KEVLVRADAS MLGVMLDNIV SNAVKYSRKG GHVYVELERR GGSVFCSVTD SGTGIPPEKI
ERLFERFYRV DESRNSQISG TGLGLALVKK LADMQHITVG LSSVEHDGTV VTFEIPAA