| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0985 |
|---|
| Symbol | |
|---|
| ID | 6374654 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 1058256 |
|---|
| End bp | 1059251 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642683486 |
|---|
| Product | ribose-phosphate pyrophosphokinase |
|---|
| Protein accession | YP_001959409 |
|---|
| Protein GI | 189499939 |
|---|
| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
|---|
| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.107036 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0501032 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTAATC CGATCAAAAT TTTCGCAGGT CGAAGCAATA CGGCGTTAGC CGAAAAAATT
GCGTCCTACC TCGGTACGTC ACTTTGTAAC GCAAAGGTTC AAAATTTTTC AGACGGGGAA
ATTTCGGTAA ACTATTTTGA GTCGATCAGA GGCTCTGATA TGTTCATCAT CCAGTCGACC
AATCCCCCGG CTGATAATTT GATGGAACTG CTCATCATGA TTGACGCTGC CAAACGATCA
TCTGCCGCGA GAATAACCGC AGTTATTCCC TATTACGGCT ATGCCCGTCA GGATCGTAAA
GATCGGCCCC GCGTCGCCAT TACTGCCAAA CTCGTTGCAA ACCTGCTCAC AGAAGCCGGA
GCGAACCGCA TTCTCACCAT GGATCTGCAT GCAGCGCAAA TCCAGGGATT TTTTGACATT
CCATTTGACC ACCTCTACTC AAGCGTTGTA CTCATTGACC ATATGCTCAA CATGAAGCTC
AACGGAAATC TTGTTGTCGC ATCCCCCGAT GTGGGCGGCG TCAAACTTGC AAGAGCTTTT
GCAGAAGCGC TCGGTACAGA TCTTGTTATT GTCGATAAAA GGCGCCCGAG AGCAAATGTT
GCGGAAGTCA TGAATATCAT CGGTGATGTG AACGGCAAGG ACGTCCTCCT GGTAGATGAC
ATGATCGACA CAGCAGGAAC GCTTGTCAAT GCGGCAAAAG CCATACAGAA TGTCGGCGGA
AGAAAGGTGT TCGCTGCCGC GACGCATGGC ATTCTGTCCG GCCCGGCCAT TGAACGTATC
AACGCTTCCG TACTTGAAAA AGTCATTATA ACCGATTCTG TCGTAACCGG CCACGCTCCG
TCAGATAAAC TTGAAACCGT CACCGTCAGC AACCTGTTCG GTGAAGCGAT CAAGAGAATA
TACGATGATG ATTCAGTCAG TTGCCTGTTC GACAGCAAAA ATCTCACAAA ACTTACAAAT
AATCATACTC AAGCGATAAA AGAGATCAAG GAATAG
|
|---|
| Protein sequence | MGNPIKIFAG RSNTALAEKI ASYLGTSLCN AKVQNFSDGE ISVNYFESIR GSDMFIIQST
NPPADNLMEL LIMIDAAKRS SAARITAVIP YYGYARQDRK DRPRVAITAK LVANLLTEAG
ANRILTMDLH AAQIQGFFDI PFDHLYSSVV LIDHMLNMKL NGNLVVASPD VGGVKLARAF
AEALGTDLVI VDKRRPRANV AEVMNIIGDV NGKDVLLVDD MIDTAGTLVN AAKAIQNVGG
RKVFAAATHG ILSGPAIERI NASVLEKVII TDSVVTGHAP SDKLETVTVS NLFGEAIKRI
YDDDSVSCLF DSKNLTKLTN NHTQAIKEIK E
|
|---|
| |