| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0977 |
|---|
| Symbol | |
|---|
| ID | 6374646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 1051483 |
|---|
| End bp | 1052364 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642683478 |
|---|
| Product | 5,10-methylenetetrahydrofolate reductase |
|---|
| Protein accession | YP_001959401 |
|---|
| Protein GI | 189499931 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0685] 5,10-methylenetetrahydrofolate reductase |
|---|
| TIGRFAM ID | [TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.310623 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.108882 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGTAA AAGAGATTCT CAACTCAGCG ACCGGGCCCG TATTCAGTTT TGAGTTTTTC
CCTCCGAAAA AAACAGAAGA CTGGGGCAAA CTTTTCCACA CAATCTCGGA ACTCATTCCT
TTTAATCCCT CCTATGTAAG CGTGACCTAT GGAGCAGGCG GATCCACACG AAGCCGCACA
CATGACCTTG TCACAAAAAT CCAGAGGGAA ACCGGTCTTA CCGTCGTCTC TCATCTGACC
TGTATCTGCT CAGGCAAAAA AGACGTTGCT GAAATTCTCG AGGATTACAG AACACAGGGC
ATAACCAATG TACTGGCCCT CCGTGGTGAC CTTCCTCCGG GATCCACTTC CTATGAAGAG
GCAACAAAGG ATTTTCCCCA TGCCGTAGAT CTTGTAAAGT TTATCGTTGA AAACTTCCCG
GAAATAGGGG TTGGCGTCGC GGGATTTCCT GAAGGACACC CCCAGACACC GAACAGACTG
AAAGAAATTG AATACCTGAA AGCAAAAGTC GATCAGGGCG CTGACTACAT CGTCACGCAG
ATGTTCTTTG ATAACAGGGA TTTCTTCGAT TTCGTAGGCA GATGCTCACT GGCAGGGATC
AATGTACCTA TCATACCGGG AATCATGCCG GTCACCACGA AAAAAGGCCT GATCAAAATG
TCCGAACTGG CCCTCGGCGC AAGGATACCC GCCGCACTCC TCAAAAAGGT GCTTGAAGCG
CCAAATGATG AAGAAGTAGC AAAAACAGGC ATCGAATGGG CAACCGAACA GACCAGAGAG
CTGATCGAGA ACCACATCAG AGGCATTCAT TTTTACACCC TCAATAACGC GGAAGCGACC
AGGAAGATTT TCACAAATAT CGCGGATAGA GCGAGAGCTT GA
|
|---|
| Protein sequence | MLVKEILNSA TGPVFSFEFF PPKKTEDWGK LFHTISELIP FNPSYVSVTY GAGGSTRSRT
HDLVTKIQRE TGLTVVSHLT CICSGKKDVA EILEDYRTQG ITNVLALRGD LPPGSTSYEE
ATKDFPHAVD LVKFIVENFP EIGVGVAGFP EGHPQTPNRL KEIEYLKAKV DQGADYIVTQ
MFFDNRDFFD FVGRCSLAGI NVPIIPGIMP VTTKKGLIKM SELALGARIP AALLKKVLEA
PNDEEVAKTG IEWATEQTRE LIENHIRGIH FYTLNNAEAT RKIFTNIADR ARA
|
|---|
| |