Gene Cphamn1_0970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0970 
Symbol 
ID6374637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1045072 
End bp1046373 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content47% 
IMG OID642683471 
ProductGTP-binding proten HflX 
Protein accessionYP_001959395 
Protein GI189499925 
COG category[R] General function prediction only 
COG ID[COG2262] GTPases 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR03156] GTP-binding protein HflX 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.602614 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGATACGT ACACCTCCTC AGAAGTAACA AAGGAACGGG CGCTGCTTGT CGGCGTGAGT 
TCCTCCCCGG AATTGACCAG ATCACTCGTT GAAGAATATC TGGAGGAACT TGCTTTTCTG
GCTGATACTG CCGGTGCAGA GGTGGTATCG AGTATTATTC AGGATCGAAA ATTCAAAGAT
CCCGCATGGT TTCTCGGAAA GGGGAAAGTT GAAGAAATCG AACATATCGT CAAGGGCGGC
CTGATAGATG TCGTTATTTT CGATGAAGAA CTCTCCCCGG TTCAGACAAG GAACCTGGAA
CGTGCTTTCG ACTGTAAGGT TGTTGATCGT ACCGAACTGA TTCTGCAGAT TTTCGCTATC
AGGGCACAAT CCTCCCAGGC GAAAATGCAG GTTGAACTTG CTCAGCTTGA ATATCTTCTT
CCGCGGCTGA CGCGTTTGTG GACTCATCTT TCGAAACAGA AGGGCGGCAT TGGAACCAAG
GGTCCCGGTG AAACGCAGAT TGAGACGGAC CGCAGGCTTG TGCGCAGAAG AATTTCTTTC
CTGAAAGGAA AACTCAAGGA TGTTGCTCTG CAGCATGCGA CACAGACGAA AGATCGAGGC
CGGATCACAC GAGTGGCATT GGTCGGTTAC ACAAACGCCG GAAAGTCAAC GCTGATGAAT
CGTCTCTGTC CTGAGGCAGA GGCGTATGTA GAGGACCGGC TGTTTGCAAC GCTTGACACA
AAAACCCGCA GGCTTGAACT GAAAATCAAC AAAGTCGTGC TGCTTTCCGA TACGGTCGGT
TTTATCCGAA AGCTGCCTCA CCGGCTTGTT GAAAGTTTTC GCTCGACGTT GGATGAAGTG
CTGCAGGCTG ATTTTCTGCT GCATGTGATC GATACCAGTC ATGAAGGTTT TGAAGAACAG
ATGCGAGTCG TTTTAGAGAC ACTGCAGGAG ATAGGGGTGC AACACGGCAA TATTATCAAT
GTTTTCAACA AGATTGATGC TGTTGAAGAC AAGGAAACTC TCCGGTCGCT TCGCCGGAAA
TATCCTGAAG CTCTTTTTGT CTCGGCAGTT CGGGGGATTA ATCTGAACTC CCTGAAAGAG
GCTGTCAGCG CATATATTGA AAGGGATTAC AAGGAATCTA CTATCAGAAC CCATATTTCC
AATTACAAGC TGATAGGATA TCTCTATGAT CATGCAGAAG TGATAGAAAA GAAACACGAG
GATGAAGATG TTGTTCTGAA GTACAGGGCA CACTATAAAG ATCTCAAACA AATCGAGGCA
AGGATAGCTG CATCAGAAAA GACAAACAGC CATGTCGCTT GA
 
Protein sequence
MDTYTSSEVT KERALLVGVS SSPELTRSLV EEYLEELAFL ADTAGAEVVS SIIQDRKFKD 
PAWFLGKGKV EEIEHIVKGG LIDVVIFDEE LSPVQTRNLE RAFDCKVVDR TELILQIFAI
RAQSSQAKMQ VELAQLEYLL PRLTRLWTHL SKQKGGIGTK GPGETQIETD RRLVRRRISF
LKGKLKDVAL QHATQTKDRG RITRVALVGY TNAGKSTLMN RLCPEAEAYV EDRLFATLDT
KTRRLELKIN KVVLLSDTVG FIRKLPHRLV ESFRSTLDEV LQADFLLHVI DTSHEGFEEQ
MRVVLETLQE IGVQHGNIIN VFNKIDAVED KETLRSLRRK YPEALFVSAV RGINLNSLKE
AVSAYIERDY KESTIRTHIS NYKLIGYLYD HAEVIEKKHE DEDVVLKYRA HYKDLKQIEA
RIAASEKTNS HVA