Gene Cphamn1_0960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0960 
SymbolaroK 
ID6374627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1034710 
End bp1035309 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content45% 
IMG OID642683462 
Productshikimate kinase 
Protein accessionYP_001959386 
Protein GI189499916 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACATC CGTCACTCAT ATTTCTTACC GGTTTCAGCG GTTCAGGAAA ATCAACCATA 
GGCCCACTGC TTGCAAATTC ACTGGGCTAT GATTTTCTCG ATCTGGATAA GGAAATTGAG
CGTCAGGCTG ATAAACCCAT CACCCGGATC TTTGCTGAAG AGGGTGAAGA CCATTTCAGG
GAACGTGAAC GCGCGATGCT TGAAAGTATC GTCGGCAGAA AGGAACTGGT GGTCTCTCTC
GGTGGCGGCG CCTTGCAGAA CAACGATTGT TTTTCGCTTA TAATCAGTTC AGGAACAATG
GTTTACCTGC ATTCAAGCCC ATTAATTCTC GCTAAAAGAA TGAGCCATAA AACTGACCGG
CCACTGATGA AAGGCGAAAA TGGCGAACGT CTTTCGAGTG AAGAGATCGA AAAAAAAATA
CTCGCGCTGC TCGAGCATCG GGAACCGCGG TATAAAACCG CCCAGATTAT GGTTGAAACC
GATACAAAAA GAATCGGGAC TACCGTCGAA GAGTTAACAA GAAAAATCGA AAGGTACGTT
CGCAGAGCGG AGAAAAACCA GAATTCACAT TCACAAACAA AAAAGCAGAG TAGAAAGTGA
 
Protein sequence
MKHPSLIFLT GFSGSGKSTI GPLLANSLGY DFLDLDKEIE RQADKPITRI FAEEGEDHFR 
ERERAMLESI VGRKELVVSL GGGALQNNDC FSLIISSGTM VYLHSSPLIL AKRMSHKTDR
PLMKGENGER LSSEEIEKKI LALLEHREPR YKTAQIMVET DTKRIGTTVE ELTRKIERYV
RRAEKNQNSH SQTKKQSRK