Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0944 |
Symbol | |
ID | 6374611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 1020737 |
End bp | 1022179 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642683446 |
Product | two component, sigma54 specific, transcriptional regulator, Fis family |
Protein accession | YP_001959370 |
Protein GI | 189499900 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTACGTT CAGAAAACCA TCATAAAAAG CCCAACGATG ATTCGGGTCA GAATAAACAC TACCGGGTAT TGGTCGCCGA CGACCATAAA TCAACCCGCA TCGTGCTGAA CCATTTCCTG AAAAAAATGG GCTATCTCCC GATTGAAGCC GTTGACGGAA ACGAGTGCGT GTCAATTCTT GAAAAAGAAA AAATCGACAT TCTGCTTCTG GATATCAATA TGCCGAACAA AGACGGCTCT GAAGTGATGA ACTATCTCCA AAAGCAAGGA ATAACCATAC CGGTTATCAT GATCACTGCA CTCGATGACA TACCGAATAC GGTAAAGTTC ATAAAAATGG GTGCATATGA ATATCTCACC AAACCTCTTG ATTTTGACCG GCTGCAGATC GTCATGAGAA ATGCCATTAG CGAATCAGCG CTTCATGACA AGGTTTCACA GCTTAAAAAA GAACTCAAAA GCAAAGAGAT TTTCAGAAAC ATCATCGGGA AAAGCGCTCA GATTAAGCAA ACGATGGAGC AGGCGCTGCA CGTCATGGAA ACCGATCTCA ATGTCCTGAT CATCGGTGAA AGCGGTACCG GCAAGGAGCT CTTCGCCCAG GCGATTCATG AAGGCAGCAA AAGAAAAAAC GGTCCGTTTA TTTCGGTTAA TTGTGCGGCC ATTTCACATG AACTTGCCGA AAGCCTCCTT TTCGGGCATA CAAAAGGTTC ATTTACCGGC GCAAATAACG ATCATCAGGG ATTTTTTGAA CAGGCTGATG GCGGCACTCT CTTCCTCGAT GAAATAGGAG ACATGAATGC CGATATACAG GCAAAAGTGC TCAGAGCGAT CCAGGAGAAA AAAATTCGCA GAGTTGGCGA AAAAAGCGAG CGGAGTATTG ATTTCAGAGT CATCTCCGCT ACTCACTGGG ATTTTGCCCA GGCTCTTGAC AGCAACTCAT TCAGGGATGA CCTCTATTAC AGACTTGAAG AATTCCCCCT CTACCTGCCT CCTCTGCGAG AACGGAAAGA GGATGTTCCC TTCCTTGCGA AACACTTTCT TGAAGAGTTC TGCAGCGCCA ACAATCTCAA GCAGCTGAGC TTTTCGCATG AAGCTCTTGA AGAAATCGAG GAATACCACT GGCCAGGCAA TATTCGTGAA CTCAAAAACG CCATTCAGAG AACCGCGATA AGCTGTAAAA ACAGTGATGA AATAGCCTCT ATTCTCTCCC ACAAAGGAGG CCGGCTCAGA AAAAACGCTA CACCGCTTGC TGCAGAAGAG AATGGCATTC AGATAGAAAC CGCGGACAGA AAGACAAAAA TACAGAGCCT TGAAGAAATT GAACGTCATG CTATTGAAGA AACCTTCAAG GCCTGTGAAG GCAATCCGAC AAAAACAGCC CAGGTGCTTG GTATCGGAAG AGCGACACTC TACAGGAAAC TCAAGAAATT CGGGCTCAAT TAA
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Protein sequence | MLRSENHHKK PNDDSGQNKH YRVLVADDHK STRIVLNHFL KKMGYLPIEA VDGNECVSIL EKEKIDILLL DINMPNKDGS EVMNYLQKQG ITIPVIMITA LDDIPNTVKF IKMGAYEYLT KPLDFDRLQI VMRNAISESA LHDKVSQLKK ELKSKEIFRN IIGKSAQIKQ TMEQALHVME TDLNVLIIGE SGTGKELFAQ AIHEGSKRKN GPFISVNCAA ISHELAESLL FGHTKGSFTG ANNDHQGFFE QADGGTLFLD EIGDMNADIQ AKVLRAIQEK KIRRVGEKSE RSIDFRVISA THWDFAQALD SNSFRDDLYY RLEEFPLYLP PLRERKEDVP FLAKHFLEEF CSANNLKQLS FSHEALEEIE EYHWPGNIRE LKNAIQRTAI SCKNSDEIAS ILSHKGGRLR KNATPLAAEE NGIQIETADR KTKIQSLEEI ERHAIEETFK ACEGNPTKTA QVLGIGRATL YRKLKKFGLN
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