Gene Cphamn1_0944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0944 
Symbol 
ID6374611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1020737 
End bp1022179 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content45% 
IMG OID642683446 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_001959370 
Protein GI189499900 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTACGTT CAGAAAACCA TCATAAAAAG CCCAACGATG ATTCGGGTCA GAATAAACAC 
TACCGGGTAT TGGTCGCCGA CGACCATAAA TCAACCCGCA TCGTGCTGAA CCATTTCCTG
AAAAAAATGG GCTATCTCCC GATTGAAGCC GTTGACGGAA ACGAGTGCGT GTCAATTCTT
GAAAAAGAAA AAATCGACAT TCTGCTTCTG GATATCAATA TGCCGAACAA AGACGGCTCT
GAAGTGATGA ACTATCTCCA AAAGCAAGGA ATAACCATAC CGGTTATCAT GATCACTGCA
CTCGATGACA TACCGAATAC GGTAAAGTTC ATAAAAATGG GTGCATATGA ATATCTCACC
AAACCTCTTG ATTTTGACCG GCTGCAGATC GTCATGAGAA ATGCCATTAG CGAATCAGCG
CTTCATGACA AGGTTTCACA GCTTAAAAAA GAACTCAAAA GCAAAGAGAT TTTCAGAAAC
ATCATCGGGA AAAGCGCTCA GATTAAGCAA ACGATGGAGC AGGCGCTGCA CGTCATGGAA
ACCGATCTCA ATGTCCTGAT CATCGGTGAA AGCGGTACCG GCAAGGAGCT CTTCGCCCAG
GCGATTCATG AAGGCAGCAA AAGAAAAAAC GGTCCGTTTA TTTCGGTTAA TTGTGCGGCC
ATTTCACATG AACTTGCCGA AAGCCTCCTT TTCGGGCATA CAAAAGGTTC ATTTACCGGC
GCAAATAACG ATCATCAGGG ATTTTTTGAA CAGGCTGATG GCGGCACTCT CTTCCTCGAT
GAAATAGGAG ACATGAATGC CGATATACAG GCAAAAGTGC TCAGAGCGAT CCAGGAGAAA
AAAATTCGCA GAGTTGGCGA AAAAAGCGAG CGGAGTATTG ATTTCAGAGT CATCTCCGCT
ACTCACTGGG ATTTTGCCCA GGCTCTTGAC AGCAACTCAT TCAGGGATGA CCTCTATTAC
AGACTTGAAG AATTCCCCCT CTACCTGCCT CCTCTGCGAG AACGGAAAGA GGATGTTCCC
TTCCTTGCGA AACACTTTCT TGAAGAGTTC TGCAGCGCCA ACAATCTCAA GCAGCTGAGC
TTTTCGCATG AAGCTCTTGA AGAAATCGAG GAATACCACT GGCCAGGCAA TATTCGTGAA
CTCAAAAACG CCATTCAGAG AACCGCGATA AGCTGTAAAA ACAGTGATGA AATAGCCTCT
ATTCTCTCCC ACAAAGGAGG CCGGCTCAGA AAAAACGCTA CACCGCTTGC TGCAGAAGAG
AATGGCATTC AGATAGAAAC CGCGGACAGA AAGACAAAAA TACAGAGCCT TGAAGAAATT
GAACGTCATG CTATTGAAGA AACCTTCAAG GCCTGTGAAG GCAATCCGAC AAAAACAGCC
CAGGTGCTTG GTATCGGAAG AGCGACACTC TACAGGAAAC TCAAGAAATT CGGGCTCAAT
TAA
 
Protein sequence
MLRSENHHKK PNDDSGQNKH YRVLVADDHK STRIVLNHFL KKMGYLPIEA VDGNECVSIL 
EKEKIDILLL DINMPNKDGS EVMNYLQKQG ITIPVIMITA LDDIPNTVKF IKMGAYEYLT
KPLDFDRLQI VMRNAISESA LHDKVSQLKK ELKSKEIFRN IIGKSAQIKQ TMEQALHVME
TDLNVLIIGE SGTGKELFAQ AIHEGSKRKN GPFISVNCAA ISHELAESLL FGHTKGSFTG
ANNDHQGFFE QADGGTLFLD EIGDMNADIQ AKVLRAIQEK KIRRVGEKSE RSIDFRVISA
THWDFAQALD SNSFRDDLYY RLEEFPLYLP PLRERKEDVP FLAKHFLEEF CSANNLKQLS
FSHEALEEIE EYHWPGNIRE LKNAIQRTAI SCKNSDEIAS ILSHKGGRLR KNATPLAAEE
NGIQIETADR KTKIQSLEEI ERHAIEETFK ACEGNPTKTA QVLGIGRATL YRKLKKFGLN