| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0940 |
|---|
| Symbol | |
|---|
| ID | 6374607 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 1016722 |
|---|
| End bp | 1018401 |
|---|
| Gene Length | 1680 bp |
|---|
| Protein Length | 559 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642683442 |
|---|
| Product | extracellular solute-binding protein family 5 |
|---|
| Protein accession | YP_001959366 |
|---|
| Protein GI | 189499896 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAA TAGTATTTTC GATAGCAATT CTTTTTCTTT TTTCAGCACT TTCCTCTTGC
AGCAACAGTT CACGGGAATA TCGTTCAGAC CAGGTTGCCA TAGGCGTTGA CGCGGATTTC
GATCACCTCA ACCCTCTTCT CATCCAGCTC TCCCTCTCCA GAGAAGTCTG CAATCTGATT
TTCCCTTCAC TGGTCAAACC AGATTATGAC CCTGAGCTTG GCACCATTAC CTTTCAACCG
AATACCGCTG AGAAATGGGA GTTCACCGAA GGCGGCAGAA AAGCCGTCTT CCATCTCCGG
AAAGACGCTG TATGGCAAGA CGGTGTGCCG GTCACGTCAC ATGATTTCAA ATTTTCCTAC
CGGCTCTATG CCGACCCGAA TATCGCCAGT TCGCGCCAGC ATTACCTCAA CGATCTGCTC
CTCCTCGATG ACGGCAGTAT TGACTTTGAC AACGGCATTG AAACTCCTGA TGACACAACG
CTTGTTCTCA CTTTCATGAA ACCGATGGCC CCGGCAATCA TTCTCGATCA TTTTAATGAC
CTGATGCCTG TCGCAAAACA TATTTTCAAG TCGATCCCTC CTGAAGAAAT CCGGATGAAA
GCTGCAGAAA CACCGATCAT CGGAGCAGGC CCCTTCAAGG TAAAAGAGTG GGCGCGTCAG
CATAAGCTGT TGCTTGAATC AAATAAAACC TCTGTGCTCC CCCAGCCTGC TGCTGTCTCG
AAAATGAGCT TTATCATCAT TCCGGAATAC ACAACCCGAC TGACGATGCT TAAGTCAGGT
CAGCTCGACG CAGTTATTTC AGCAGGCGGC ATCAACCCCA AAGATCTTGA AGAGCTGAAA
AGAAGCAATC CGGAGATCTC GATCAAACCC GTACGAAACC GCTACTTTGA CAGTATTGTC
TGGCTCAATA TCAACGGCGA GCAGTACAGG GAAAACAAAA TAATAGAACC GAATGTCTTT
TTCGGAGACA AAAGGGTACG AAAGGCCATG ACCTATGCCA TAGACCGCCA GTCGATCATC
GACGGGTTTA TGGGCCCTGA ACATGCCACC ATTGTCAACA CGTCCCTCTC TCCTGCATAT
GAAGCTATCG CAAACACATC GCTTGGAACT TACGCATTCG ACCCGCAAAA GGCCGAATCG
CTGCTCAGGC AATCAGGCTG GGAGCCGGGA CCGGACGGCA TCCTGCAGAA AAACGGCACA
CGCTTTTCAT TCACGCTTGC TGCCCCTGCA GGTAACCCCC GAAGGAATTA TGCGGCAACA
ATTATCCAGC AGAACCTCCG CGAGATCGGT ATAGAATGTA AACTGAGAAT AGATGAAAAA
CTCATTTTTC TGAAAAACCA GAACGAGTTC CGGTACGATG CAGCCCTGTC GGGATTAGCC
GCAGAAACAC TTCCGTTTCA GCTTATCATC TGGGGGTCGG ACTTCGAAAA CCGCACGTTC
AACTCTTCGG CTTTTCAGAA TCAGGCCCTG GACCGCGTCA TCAGCCGCCT TAACACCCCC
CTGCCTGAAA ACGAAAGCCT CATCTTGTGG AAAGAGTACC AGAAAATCCT GCATGAAGAA
CAGCCGAGAA CCTTCCTCTA CTACTATGAC GAACTTGAAG GGTTCAGCAA CCGGGTAAAA
AATGTAGAAG TAAACCTTCT TTCCACCCTT TATAACGCGT ATGCGTGGGA ACTGGAATAG
|
|---|
| Protein sequence | MQKIVFSIAI LFLFSALSSC SNSSREYRSD QVAIGVDADF DHLNPLLIQL SLSREVCNLI
FPSLVKPDYD PELGTITFQP NTAEKWEFTE GGRKAVFHLR KDAVWQDGVP VTSHDFKFSY
RLYADPNIAS SRQHYLNDLL LLDDGSIDFD NGIETPDDTT LVLTFMKPMA PAIILDHFND
LMPVAKHIFK SIPPEEIRMK AAETPIIGAG PFKVKEWARQ HKLLLESNKT SVLPQPAAVS
KMSFIIIPEY TTRLTMLKSG QLDAVISAGG INPKDLEELK RSNPEISIKP VRNRYFDSIV
WLNINGEQYR ENKIIEPNVF FGDKRVRKAM TYAIDRQSII DGFMGPEHAT IVNTSLSPAY
EAIANTSLGT YAFDPQKAES LLRQSGWEPG PDGILQKNGT RFSFTLAAPA GNPRRNYAAT
IIQQNLREIG IECKLRIDEK LIFLKNQNEF RYDAALSGLA AETLPFQLII WGSDFENRTF
NSSAFQNQAL DRVISRLNTP LPENESLILW KEYQKILHEE QPRTFLYYYD ELEGFSNRVK
NVEVNLLSTL YNAYAWELE
|
|---|
| |