Gene Cphamn1_0932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0932 
Symbol 
ID6374599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1007775 
End bp1008524 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content49% 
IMG OID642683434 
ProductUroporphyrinogen-III synthase 
Protein accessionYP_001959358 
Protein GI189499888 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGTG TTCTTGTCAC CCGACCGAAA CATCAGGCAG GATCATTTGT ACAGGAATTG 
AAAAAGTATA ACCTGGGCTC GGTTGTCTTT CCGACAATCG AGATCAGGCC TGCTTCGGGC
TGGCAAATCC CTGATATCTC ATCGTATAGC GGCGCTTTTT TCACAAGCCC GAACAGTGTC
CGGTATTTTC TTGAACGGCT CAGGACCGAA GCGCCGGATG AGCTGCGGAA ACTGACAAGC
ACCAGGGTTT TTGCGGTTGG GAAAACAACA GCAGGGGATC TTGCAGAGTA TGGAATAGAA
ACGGAGCCTA TCCCTAAAGT TGCCGACGCA GTCAACCTCA TGCAGGAAAT CAGTCCGGAG
GAAATTCAGG GAAAATCGTT TCTTTTTCTT CGAGGCAACC TTTCCCTGGG TATCATACCG
GCAGCCATAG CAGAACGTGG AGGCAGGTGT GACTCCATAA TTGTTTATGA AAACCATCCG
CCTGATCTTG AAGCCACCGA AAAGGTAAAA AAAATGGTGG GCGAAGGCAA AATATCATGT
TTGTCCTTCA CCAGTCCCTC TACTGCCCAG AACTATTTTA AAGCTGTCGG CTCAAAGAAA
ATACCTTCAG GAGTTCTGGT AGCCGCCATC GGAAAAACAA CAGCGACCGC GCTTGAAAAA
CTTGGCGTCA GCGTCGATAT CGTCCCCGAA TACTATGACG GCCCTCATTT CGCAAAAGCC
ATCGCGGAAG CACTTCAAAA AAATTGCTGA
 
Protein sequence
MKSVLVTRPK HQAGSFVQEL KKYNLGSVVF PTIEIRPASG WQIPDISSYS GAFFTSPNSV 
RYFLERLRTE APDELRKLTS TRVFAVGKTT AGDLAEYGIE TEPIPKVADA VNLMQEISPE
EIQGKSFLFL RGNLSLGIIP AAIAERGGRC DSIIVYENHP PDLEATEKVK KMVGEGKISC
LSFTSPSTAQ NYFKAVGSKK IPSGVLVAAI GKTTATALEK LGVSVDIVPE YYDGPHFAKA
IAEALQKNC