Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0932 |
Symbol | |
ID | 6374599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 1007775 |
End bp | 1008524 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642683434 |
Product | Uroporphyrinogen-III synthase |
Protein accession | YP_001959358 |
Protein GI | 189499888 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1587] Uroporphyrinogen-III synthase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGAGTG TTCTTGTCAC CCGACCGAAA CATCAGGCAG GATCATTTGT ACAGGAATTG AAAAAGTATA ACCTGGGCTC GGTTGTCTTT CCGACAATCG AGATCAGGCC TGCTTCGGGC TGGCAAATCC CTGATATCTC ATCGTATAGC GGCGCTTTTT TCACAAGCCC GAACAGTGTC CGGTATTTTC TTGAACGGCT CAGGACCGAA GCGCCGGATG AGCTGCGGAA ACTGACAAGC ACCAGGGTTT TTGCGGTTGG GAAAACAACA GCAGGGGATC TTGCAGAGTA TGGAATAGAA ACGGAGCCTA TCCCTAAAGT TGCCGACGCA GTCAACCTCA TGCAGGAAAT CAGTCCGGAG GAAATTCAGG GAAAATCGTT TCTTTTTCTT CGAGGCAACC TTTCCCTGGG TATCATACCG GCAGCCATAG CAGAACGTGG AGGCAGGTGT GACTCCATAA TTGTTTATGA AAACCATCCG CCTGATCTTG AAGCCACCGA AAAGGTAAAA AAAATGGTGG GCGAAGGCAA AATATCATGT TTGTCCTTCA CCAGTCCCTC TACTGCCCAG AACTATTTTA AAGCTGTCGG CTCAAAGAAA ATACCTTCAG GAGTTCTGGT AGCCGCCATC GGAAAAACAA CAGCGACCGC GCTTGAAAAA CTTGGCGTCA GCGTCGATAT CGTCCCCGAA TACTATGACG GCCCTCATTT CGCAAAAGCC ATCGCGGAAG CACTTCAAAA AAATTGCTGA
|
Protein sequence | MKSVLVTRPK HQAGSFVQEL KKYNLGSVVF PTIEIRPASG WQIPDISSYS GAFFTSPNSV RYFLERLRTE APDELRKLTS TRVFAVGKTT AGDLAEYGIE TEPIPKVADA VNLMQEISPE EIQGKSFLFL RGNLSLGIIP AAIAERGGRC DSIIVYENHP PDLEATEKVK KMVGEGKISC LSFTSPSTAQ NYFKAVGSKK IPSGVLVAAI GKTTATALEK LGVSVDIVPE YYDGPHFAKA IAEALQKNC
|
| |