Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0924 |
Symbol | |
ID | 6374591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 998040 |
End bp | 1000145 |
Gene Length | 2106 bp |
Protein Length | 701 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642683426 |
Product | integral membrane sensor hybrid histidine kinase |
Protein accession | YP_001959350 |
Protein GI | 189499880 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTATGC TAAGCTTCAT AAAAACGTCA TTCAGTCGGG GAACTCAGGT TTCTCGATTC AATGTGATGG CCGCTGCGGC ACTTGGCGCA CCGGCACACC TTTTATTTTA TGTAGCCTAC AAGTATATTT TCCAGCTCGA GTATGACAGC ATCATTCTTC GTTTAATTGC TGTAGCCTTG TGTCTCGGCG TGTTATTCAA ACTGAAGAAT CCTGATTTTC TCGGTCGATT TTTCCCTGTC TACTGGCATA CCCTGCTCAT TTTCGTTCTG CCATTTATTC TTACTGTGAT GGTGCTCAAG AACAATTTTC ATGAGGCATG GCTTTACTGG GAAATTTTCA TGATTTTTGT GCTGATCTCC TTTGTACCGA ACTTGCTGAT GTTTCTTTTT GATTTATGTG TCGGCGTGGT TGCCGCTTTT CTCTTTTTTC TGCTGACGCC TCCGGCTATC GTTCTTGATC CGCAGTTTGA CATTCCACCT TACGTGCTTC TTGTCGTCTT TTCAATAGTT GCCGGGTATG TGTTCAGTTA CAGTAACCGG AAAGGTATTG TCGCGCAGGA AAAAAATTCA GCTCTTCAGG CCCTTGCAGG AAGTATAGCG CATGAAATGC GCAATCCCCT TGGTCAGGTG AAATTCAGTT TCCAGAGTAT CCTGGAAGAA CTGCCGATAC ATCATGCCGA CAAGGTTTAT GAAATACTGA CTGCCCAGAC GCTCGATACT ATCTATTTGA GAGTCGCACA GGGACAGATA GCGGTGAACA GAGGAGTGCA GGTTATCAAC ATGATTCTTG ACGAAGTTAA AGACAAGCCT ATAGATAAAA GCGGGTTTTC TTTTCTCTCT GTTGAGGTGA TTACGAGGAA GGCCCTTGAT GAATATGGTT ACGAGGACGA TCATGATCGT CAAAAACTTT CTTTGGAATG CAAGGGGAAT TTTCTCATCA AGGCAGATGA AACCATGTAT GTTTTTGTGC TGTTCAACCT CATCATGAAC GCATATTATT TTATCAAAAA CTATCCGGAT GCCGGAATTT CCGTCAGGAT TGAAAAAGGG GACTCTTTCA ATCGGGTGTA TGTGAGGGAT ACAGGGCCGG GCATACCGTC TGAGAATATC GGCAAACTGT TTGAAGCATA TTATACTTCC GGAAAAAAGG GAGGGACTGG CCTTGGTCTG GCCTATTGCA AACGGGTGAT GAAGGCTTTT GGAGGCGATA TCAGCTGTGA TTCGGTAGAG GGTGAGTATA CGGAGTTTTG TCTGGATTTC CCTGTTGTCA GTCAGCAGGA GCTTCTTGAG TTCAGGCAAT CAATGGTGAC AAAATATAGT GATGTATTCT CCGGCAAGCG TCTTTTGCTG GTTGATGATG AAGTCGATGA CAGGGAGCCG GTTAAAGCGT ACCTTTCTCC TTACAATGTG AGTATTGAAG AAGCTGATAA TGGAAAAGAT GCGATCGATA TGCTGCTGAA AAAGCGGTAT GATGCAATAC TGATGAATCT GAATATGCCG GTGATGAATG GTTACGAAGC TGCGGAAGCA ATCAGGAGCG GGAAAGCGGG TTCTTATGCG AAAAACGTTC CGCTGATCGG GCATACCGCG GCTCCGGATT ATATTGCCCG CGGCAAAACG GAAAAAGTAG GAATGCAGGG GTTTGTTTCA AAGCCGATTG TTGAATCTGA ATTGATCAGC CTTCTTGCTT CAGCGCTGAA TGGCGAGAGT TGTATAACGC AGAGTGATTT ATCCGGTGTC AATGTTTTGC TTGTTGATGA TTCTTCATTC AACAGGCTTG TGCTGAGAAG CATTCTTGAA AAACATAACA TCGGTATTGT TGAAGCTGTA AGCGGAAAAA GCGCGATAGA AAAGCTGATG CAGGACGATT GCAGTTTGAT ATTGATGGAT ATTCAGATGC CGGAACTTGA TGGTATCGAA ACAACGCGCT ATATTCGCGG CAGTGATTTC GGATGCAATA GCACTGTTCC TATTATCGGT CTCAGCGGTG AGTCTGACGA GGAGGATATC AGGAATGCTC TTGAAGCAGG CATGGATGAC TATATGCTCA AGCCTGTTGA CAGTGCTGTT TTGATAAGTA AAATAAAGAA ATGGGGTATA TGCTGA
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Protein sequence | MSMLSFIKTS FSRGTQVSRF NVMAAAALGA PAHLLFYVAY KYIFQLEYDS IILRLIAVAL CLGVLFKLKN PDFLGRFFPV YWHTLLIFVL PFILTVMVLK NNFHEAWLYW EIFMIFVLIS FVPNLLMFLF DLCVGVVAAF LFFLLTPPAI VLDPQFDIPP YVLLVVFSIV AGYVFSYSNR KGIVAQEKNS ALQALAGSIA HEMRNPLGQV KFSFQSILEE LPIHHADKVY EILTAQTLDT IYLRVAQGQI AVNRGVQVIN MILDEVKDKP IDKSGFSFLS VEVITRKALD EYGYEDDHDR QKLSLECKGN FLIKADETMY VFVLFNLIMN AYYFIKNYPD AGISVRIEKG DSFNRVYVRD TGPGIPSENI GKLFEAYYTS GKKGGTGLGL AYCKRVMKAF GGDISCDSVE GEYTEFCLDF PVVSQQELLE FRQSMVTKYS DVFSGKRLLL VDDEVDDREP VKAYLSPYNV SIEEADNGKD AIDMLLKKRY DAILMNLNMP VMNGYEAAEA IRSGKAGSYA KNVPLIGHTA APDYIARGKT EKVGMQGFVS KPIVESELIS LLASALNGES CITQSDLSGV NVLLVDDSSF NRLVLRSILE KHNIGIVEAV SGKSAIEKLM QDDCSLILMD IQMPELDGIE TTRYIRGSDF GCNSTVPIIG LSGESDEEDI RNALEAGMDD YMLKPVDSAV LISKIKKWGI C
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