Gene Cphamn1_0924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0924 
Symbol 
ID6374591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp998040 
End bp1000145 
Gene Length2106 bp 
Protein Length701 aa 
Translation table11 
GC content44% 
IMG OID642683426 
Productintegral membrane sensor hybrid histidine kinase 
Protein accessionYP_001959350 
Protein GI189499880 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATGC TAAGCTTCAT AAAAACGTCA TTCAGTCGGG GAACTCAGGT TTCTCGATTC 
AATGTGATGG CCGCTGCGGC ACTTGGCGCA CCGGCACACC TTTTATTTTA TGTAGCCTAC
AAGTATATTT TCCAGCTCGA GTATGACAGC ATCATTCTTC GTTTAATTGC TGTAGCCTTG
TGTCTCGGCG TGTTATTCAA ACTGAAGAAT CCTGATTTTC TCGGTCGATT TTTCCCTGTC
TACTGGCATA CCCTGCTCAT TTTCGTTCTG CCATTTATTC TTACTGTGAT GGTGCTCAAG
AACAATTTTC ATGAGGCATG GCTTTACTGG GAAATTTTCA TGATTTTTGT GCTGATCTCC
TTTGTACCGA ACTTGCTGAT GTTTCTTTTT GATTTATGTG TCGGCGTGGT TGCCGCTTTT
CTCTTTTTTC TGCTGACGCC TCCGGCTATC GTTCTTGATC CGCAGTTTGA CATTCCACCT
TACGTGCTTC TTGTCGTCTT TTCAATAGTT GCCGGGTATG TGTTCAGTTA CAGTAACCGG
AAAGGTATTG TCGCGCAGGA AAAAAATTCA GCTCTTCAGG CCCTTGCAGG AAGTATAGCG
CATGAAATGC GCAATCCCCT TGGTCAGGTG AAATTCAGTT TCCAGAGTAT CCTGGAAGAA
CTGCCGATAC ATCATGCCGA CAAGGTTTAT GAAATACTGA CTGCCCAGAC GCTCGATACT
ATCTATTTGA GAGTCGCACA GGGACAGATA GCGGTGAACA GAGGAGTGCA GGTTATCAAC
ATGATTCTTG ACGAAGTTAA AGACAAGCCT ATAGATAAAA GCGGGTTTTC TTTTCTCTCT
GTTGAGGTGA TTACGAGGAA GGCCCTTGAT GAATATGGTT ACGAGGACGA TCATGATCGT
CAAAAACTTT CTTTGGAATG CAAGGGGAAT TTTCTCATCA AGGCAGATGA AACCATGTAT
GTTTTTGTGC TGTTCAACCT CATCATGAAC GCATATTATT TTATCAAAAA CTATCCGGAT
GCCGGAATTT CCGTCAGGAT TGAAAAAGGG GACTCTTTCA ATCGGGTGTA TGTGAGGGAT
ACAGGGCCGG GCATACCGTC TGAGAATATC GGCAAACTGT TTGAAGCATA TTATACTTCC
GGAAAAAAGG GAGGGACTGG CCTTGGTCTG GCCTATTGCA AACGGGTGAT GAAGGCTTTT
GGAGGCGATA TCAGCTGTGA TTCGGTAGAG GGTGAGTATA CGGAGTTTTG TCTGGATTTC
CCTGTTGTCA GTCAGCAGGA GCTTCTTGAG TTCAGGCAAT CAATGGTGAC AAAATATAGT
GATGTATTCT CCGGCAAGCG TCTTTTGCTG GTTGATGATG AAGTCGATGA CAGGGAGCCG
GTTAAAGCGT ACCTTTCTCC TTACAATGTG AGTATTGAAG AAGCTGATAA TGGAAAAGAT
GCGATCGATA TGCTGCTGAA AAAGCGGTAT GATGCAATAC TGATGAATCT GAATATGCCG
GTGATGAATG GTTACGAAGC TGCGGAAGCA ATCAGGAGCG GGAAAGCGGG TTCTTATGCG
AAAAACGTTC CGCTGATCGG GCATACCGCG GCTCCGGATT ATATTGCCCG CGGCAAAACG
GAAAAAGTAG GAATGCAGGG GTTTGTTTCA AAGCCGATTG TTGAATCTGA ATTGATCAGC
CTTCTTGCTT CAGCGCTGAA TGGCGAGAGT TGTATAACGC AGAGTGATTT ATCCGGTGTC
AATGTTTTGC TTGTTGATGA TTCTTCATTC AACAGGCTTG TGCTGAGAAG CATTCTTGAA
AAACATAACA TCGGTATTGT TGAAGCTGTA AGCGGAAAAA GCGCGATAGA AAAGCTGATG
CAGGACGATT GCAGTTTGAT ATTGATGGAT ATTCAGATGC CGGAACTTGA TGGTATCGAA
ACAACGCGCT ATATTCGCGG CAGTGATTTC GGATGCAATA GCACTGTTCC TATTATCGGT
CTCAGCGGTG AGTCTGACGA GGAGGATATC AGGAATGCTC TTGAAGCAGG CATGGATGAC
TATATGCTCA AGCCTGTTGA CAGTGCTGTT TTGATAAGTA AAATAAAGAA ATGGGGTATA
TGCTGA
 
Protein sequence
MSMLSFIKTS FSRGTQVSRF NVMAAAALGA PAHLLFYVAY KYIFQLEYDS IILRLIAVAL 
CLGVLFKLKN PDFLGRFFPV YWHTLLIFVL PFILTVMVLK NNFHEAWLYW EIFMIFVLIS
FVPNLLMFLF DLCVGVVAAF LFFLLTPPAI VLDPQFDIPP YVLLVVFSIV AGYVFSYSNR
KGIVAQEKNS ALQALAGSIA HEMRNPLGQV KFSFQSILEE LPIHHADKVY EILTAQTLDT
IYLRVAQGQI AVNRGVQVIN MILDEVKDKP IDKSGFSFLS VEVITRKALD EYGYEDDHDR
QKLSLECKGN FLIKADETMY VFVLFNLIMN AYYFIKNYPD AGISVRIEKG DSFNRVYVRD
TGPGIPSENI GKLFEAYYTS GKKGGTGLGL AYCKRVMKAF GGDISCDSVE GEYTEFCLDF
PVVSQQELLE FRQSMVTKYS DVFSGKRLLL VDDEVDDREP VKAYLSPYNV SIEEADNGKD
AIDMLLKKRY DAILMNLNMP VMNGYEAAEA IRSGKAGSYA KNVPLIGHTA APDYIARGKT
EKVGMQGFVS KPIVESELIS LLASALNGES CITQSDLSGV NVLLVDDSSF NRLVLRSILE
KHNIGIVEAV SGKSAIEKLM QDDCSLILMD IQMPELDGIE TTRYIRGSDF GCNSTVPIIG
LSGESDEEDI RNALEAGMDD YMLKPVDSAV LISKIKKWGI C