| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0919 |
|---|
| Symbol | |
|---|
| ID | 6374586 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 992588 |
|---|
| End bp | 993040 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642683421 |
|---|
| Product | peptidase S24 and S26 domain protein |
|---|
| Protein accession | YP_001959345 |
|---|
| Protein GI | 189499875 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.391106 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTGA TGAAAATGTA TAACAGCCCT TCGATTGATT TTTATTCCGC CGATATGATG
ACGGAACTCG AATTGCCGCT TGCCTCGTCG GCAATTTCCG CCGGATTTCC GTCACCGGCT
GAAGATCATC TCGAATTGAA ACTGGATCTG AACAAAGAGC TGATCCGTCA TCCGAGTGCC
ACGTTTTATG GTCGGGTCAA GGGATACTCG ATGGTTGACG CAGGAATAGA CGAGGGGGAT
ATCCTTGTTA TCGACAAGTC GCTGGATCCC AAAGAAGGAG ATATTGCTGT CTGTTTTCTC
GACGGTGAAT TTACGGTCAA GCGTATCGGA AAGCAGGGCG GCAGGATGTG CCTGATGCCG
GCCAATGAAG AGTTCGACCC GATTCCCGTT ACCGGAGAGA ACGAATTTAT CGTATGGGGC
ATAGTGACCT ATGTCATCCA TAAAGCTCGA TAG
|
|---|
| Protein sequence | MKLMKMYNSP SIDFYSADMM TELELPLASS AISAGFPSPA EDHLELKLDL NKELIRHPSA
TFYGRVKGYS MVDAGIDEGD ILVIDKSLDP KEGDIAVCFL DGEFTVKRIG KQGGRMCLMP
ANEEFDPIPV TGENEFIVWG IVTYVIHKAR
|
|---|
| |