Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0908 |
Symbol | tpiA |
ID | 6374575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 982279 |
End bp | 983031 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642683410 |
Product | triosephosphate isomerase |
Protein accession | YP_001959334 |
Protein GI | 189499864 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0149] Triosephosphate isomerase |
TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.842553 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTAAAA AAATTGTTGT TGGTAACTGG AAAATGAACA AGAATGTCGC AGAAGGCGTG GCGCTCGCTT CGTCGATTCT TGAAAATCTT GATGGCGGAA AGATGGCCTG TGAGGTAGGT ATTGCGCCTG CATATCCGGT GCTTTCAGAG GTAGGGAGAG TCATTGAGGG AAGTGATATT TGTCTTGTGG CTCAGAATTG CCACTATGAA GATGAGGGAG CCTATACCGG TGAGGTATCA GTGCGTATGC TTGATTCTCT CGGATGTTCA TACATTATAG TCGGTCACTC GGAACGCAGA CAGTATTTCG GTGAAACCAA CCGGACAGTC AACCTCAGGC TGAAAAAAGC TCTGGAGGGC GGAATGCGGG TGATTCTGTG TATCGGTGAA ACCCTTGAAG AGAGGGAGGC CGGTGTGACT GACGCTATCG TAACCGCCCA GGTAAGGGAA GGGCTTGCAG ATATAGAGGA TCTTGGTAAC GTTGTGCTTG CCTATGAGCC GGTGTGGGCT ATCGGGACGG GAAAGACGGC AACTCCCGAA CAGGCTGACG CGGTGCATGC TTCCATACGT GCGACCATAA GCGATATGTA TGGAGAGGCC GATGCAGAAG ACATCCGGAT TCAGTATGGC GGCAGCGTGA AGCCATCCAA TGCTGTGGAA CTTTTCGGTA TGCCCAATAT AGACGGAGGA CTTATTGGCG GAGCCAGCCT CAAGGCCGAC GATTTCGTTG CCATCGTCAA TGCAGCCGGT TAG
|
Protein sequence | MRKKIVVGNW KMNKNVAEGV ALASSILENL DGGKMACEVG IAPAYPVLSE VGRVIEGSDI CLVAQNCHYE DEGAYTGEVS VRMLDSLGCS YIIVGHSERR QYFGETNRTV NLRLKKALEG GMRVILCIGE TLEEREAGVT DAIVTAQVRE GLADIEDLGN VVLAYEPVWA IGTGKTATPE QADAVHASIR ATISDMYGEA DAEDIRIQYG GSVKPSNAVE LFGMPNIDGG LIGGASLKAD DFVAIVNAAG
|
| |