Gene Cphamn1_0908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0908 
SymboltpiA 
ID6374575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp982279 
End bp983031 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content51% 
IMG OID642683410 
Producttriosephosphate isomerase 
Protein accessionYP_001959334 
Protein GI189499864 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0149] Triosephosphate isomerase 
TIGRFAM ID[TIGR00419] triosephosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.842553 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAAAA AAATTGTTGT TGGTAACTGG AAAATGAACA AGAATGTCGC AGAAGGCGTG 
GCGCTCGCTT CGTCGATTCT TGAAAATCTT GATGGCGGAA AGATGGCCTG TGAGGTAGGT
ATTGCGCCTG CATATCCGGT GCTTTCAGAG GTAGGGAGAG TCATTGAGGG AAGTGATATT
TGTCTTGTGG CTCAGAATTG CCACTATGAA GATGAGGGAG CCTATACCGG TGAGGTATCA
GTGCGTATGC TTGATTCTCT CGGATGTTCA TACATTATAG TCGGTCACTC GGAACGCAGA
CAGTATTTCG GTGAAACCAA CCGGACAGTC AACCTCAGGC TGAAAAAAGC TCTGGAGGGC
GGAATGCGGG TGATTCTGTG TATCGGTGAA ACCCTTGAAG AGAGGGAGGC CGGTGTGACT
GACGCTATCG TAACCGCCCA GGTAAGGGAA GGGCTTGCAG ATATAGAGGA TCTTGGTAAC
GTTGTGCTTG CCTATGAGCC GGTGTGGGCT ATCGGGACGG GAAAGACGGC AACTCCCGAA
CAGGCTGACG CGGTGCATGC TTCCATACGT GCGACCATAA GCGATATGTA TGGAGAGGCC
GATGCAGAAG ACATCCGGAT TCAGTATGGC GGCAGCGTGA AGCCATCCAA TGCTGTGGAA
CTTTTCGGTA TGCCCAATAT AGACGGAGGA CTTATTGGCG GAGCCAGCCT CAAGGCCGAC
GATTTCGTTG CCATCGTCAA TGCAGCCGGT TAG
 
Protein sequence
MRKKIVVGNW KMNKNVAEGV ALASSILENL DGGKMACEVG IAPAYPVLSE VGRVIEGSDI 
CLVAQNCHYE DEGAYTGEVS VRMLDSLGCS YIIVGHSERR QYFGETNRTV NLRLKKALEG
GMRVILCIGE TLEEREAGVT DAIVTAQVRE GLADIEDLGN VVLAYEPVWA IGTGKTATPE
QADAVHASIR ATISDMYGEA DAEDIRIQYG GSVKPSNAVE LFGMPNIDGG LIGGASLKAD
DFVAIVNAAG