| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0905 |
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| Symbol | |
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| ID | 6374572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 979894 |
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| End bp | 981402 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642683407 |
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| Product | protease Do |
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| Protein accession | YP_001959331 |
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| Protein GI | 189499861 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGA ACAAACTCAC CGCTATTTTT TTGATTCTGG CAGGTGTTGC CATAGGAGGG
CTCGTTTTTT CCAATCTGGA GTTTACCTTT CCGGGACAGC AGTATGAGGT GGCGGTAACC
AATCATGCCG GTGTGGCGAC CGCAGCAAGC AAGGTCAAGG AGAGGCCGAT TCATACGCTC
AGAGACTTCA ACGAAGCTTT TGTCGATATC GCTGAATCGG CAACACCTTC GGTCGTGACT
ATTTTTACCG AAAAAACAGT CAACCGAAGG TTTGTCTCTC CCTTTGACCT TTTTGGCAGC
CCTTTTGACG GTTTTTTTGA TCGTCCGCGC GGGAACCAAA CCCCCGAAAG TCGCAAGGAG
GTGCTGCGTG GTTTAGGTTC AGGGGTTATT ATCAGCAAGG ACGGTTACAT TCTCACGAAC
AACCATGTTA TTGAAAATGC GGATACTATC TACATCAGGA CCTATGATAA CAAGAGGCAC
GAAGCCAAAA TTATCGGTTC AGACCCGAAA ACAGATATCG CGGTGATTAA AACCGATGCG
AAAAATCTCA ACCCTATTGC AATCGGCGAC AGTGACGCAC TGCGGGTCGG GGAATGGGTG
ATCGCTATCG GCAGCCCTCT GGGCGAAAAC CTTGCACGCA CGGTAACTCA GGGGATCGTC
AGCGCCAAAG GCCGCGCGAA TGTCGGACTT GCCGATTATG AGGACTTTAT CCAGACTGAC
GCGGCGATTA ATCCGGGAAA TTCAGGGGGC CCCCTGGTAA ATATCGATGG AGAACTTGTC
GGTATCAATA CGGCTATAGC CAGCAGGACA GGAGGGTTTC AGGGCATTGG CTTTGCAGTG
CCCTCCAATA TGGCACGTCA GATTATGCAG TCACTTGTCA GGAGCGGCAA GGTTACCAGA
GGCTGGCTTG GCGTTACCAT ACAGGATGTC GATGAGAATA TCGCCAAAGG GTTGAAACTC
GATAGAGCTG ATGGCGTTCT GGTCGGTACG GTTCTGGAAA ACAGTCCGGC AAAAGCAGGC
GGGCTGAAGA CCGGAGATGT TATTCTTGAA ATAAATGGTA AAAAACTCAG GGATACCGTT
GAACTTCGTA ATACCATAGC CAGGACATCC CCGGGAACGA CTGTTCAGCT GACTCTATGG
AGGGACGGCG CTCTTAAAAA AGTATCTGTC AAGCTGAACG AGATACCCGA TCAGCCGGTG
GCTGCCGAGC AGCAGCAGGA GATGGACGAG CTGCTTGGGT TCAATGCCGC TCCGCTATCA
CCTGAGCTTG CCGCACAGTA CAGGTTACAG GCTGACGCGG GAAAGGTCGT GGTAACGGAA
GTCACTCAAG GGAGCAACGC TTATCGCGCA GGACTGCGTA ACGGTGATAG CATAAAAGCG
GTCAACAGAA AGAATATTTC CTCCTATAAG CAGTTTTTAT CCCTTGTCGG CAAGATGAAG
CAGGGAGACC TTCTGTTTCT GCTCGTCGAG CGTGGCGGAA GTAAGGTCTA TTTTGCGTTT
AACCTGTAA
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| Protein sequence | MKKNKLTAIF LILAGVAIGG LVFSNLEFTF PGQQYEVAVT NHAGVATAAS KVKERPIHTL
RDFNEAFVDI AESATPSVVT IFTEKTVNRR FVSPFDLFGS PFDGFFDRPR GNQTPESRKE
VLRGLGSGVI ISKDGYILTN NHVIENADTI YIRTYDNKRH EAKIIGSDPK TDIAVIKTDA
KNLNPIAIGD SDALRVGEWV IAIGSPLGEN LARTVTQGIV SAKGRANVGL ADYEDFIQTD
AAINPGNSGG PLVNIDGELV GINTAIASRT GGFQGIGFAV PSNMARQIMQ SLVRSGKVTR
GWLGVTIQDV DENIAKGLKL DRADGVLVGT VLENSPAKAG GLKTGDVILE INGKKLRDTV
ELRNTIARTS PGTTVQLTLW RDGALKKVSV KLNEIPDQPV AAEQQQEMDE LLGFNAAPLS
PELAAQYRLQ ADAGKVVVTE VTQGSNAYRA GLRNGDSIKA VNRKNISSYK QFLSLVGKMK
QGDLLFLLVE RGGSKVYFAF NL
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