Gene Cphamn1_0890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0890 
Symbol 
ID6374557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp962239 
End bp963906 
Gene Length1668 bp 
Protein Length555 aa 
Translation table11 
GC content51% 
IMG OID642683392 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_001959316 
Protein GI189499846 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0367824 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATTGT CGGTCATGCT GCATCTGCTT CGTTACAGGG AACTTGTGGT AGTACACTAC 
AGCGGCGTCC CCTGTGCCTT GCATCTACAG CATGCTCAAC AATCGCTCAA CGTAGGTTCG
ACAATTATGC CTGACAAGAT CCCAACCATT GCAGAAGCCT GTATCACTAT CGATTCACAT
CGGTCATGGA TCGGGTATGC TGCGTTGCAA CATGCGCTGG GATGTGAGGC TCCACTGAGA
GAACGCTGTG CTGTTTCCTC CGGCCATGTC CACGGGAGCG TCCGGCTTGA CAAAGGCATT
CGCCTCTACG ATCAGCGCTA CCGTCCCAAT AATGACGTTG CCGGGCATCT CTTTTTCTCG
CTCAAACATG AGACTCTCGA TCTGCTTGTC CTGAAAGAGA TTCTTGTTTG TCTCGGCGGT
GAAACCATTA CCGAAATTGT CCAAACGTAT CGACAGAAAC AATTGGCACG AAAGCTGTGG
TTTCTCTATG AATGGTTGAC TGCAGAAAGA CTTCCCCTCG ATGATGCAGA AACGCGAATA
CGTTACGTAC CGATCCTCGA TTCAACGCAT TATTTCACAG GTTCAAACAG GCCATCGGCC
CGGCACCGGA TTATTGACAA CCTGCCGGGC AACCGTTCAT TCTGTCCTCT GATACACAAA
ACAGCGGTTC TACAAAAATT CATCGCTCTG GACCTCTCAG ACAAGGTCAG AAAGGTCATG
GGAAGAGCAA GTCGTGACGT CTGGAGACGG GCAGCAAGTT TCTTACTGCT TGCCGACAGC
CGTGCATCGT TTGCCATCGA GGGTGAACGC CCGCCCAGAA ACCGAATCGA GCGATGGGCA
CAGGTTATTC AAAAATCGGG AAACCGTCCG CTTTCGATGA CTGAAATCCT GAACATGCAT
GGGGCACTCA TCCAGGATCA CCGTTTCGTC ACTGCAGGAT TTCGAACTGA AGGCGTATTC
CTTGGCGAAC GGGACCGTAA CGGAGAACCG CAGCCCGAAT TCATCGGTGC CCGCCCACAG
GATATAGAAT CCCTCGTGAA AGGACTGGTG GACAGTCATC GCATCATGGC GGAAGCTTCG
ATTGACCCGG TCATCCACGC CGCTGCCATA GCGTTCGGCC TTGTCTTCAT CCATCCATTC
GAAGACGGCA ACGGCCGCAT GCACCGTGCA CTGATCCATC AGATTCTCAC CGAACGAAGC
TTTGCCCCGC CCGGAATAGT ATTTCCGGTC AGCGCGGTTA TACTTGAACG CATAGAGGAA
TATCAGCGCA TCCTCCGCGA ATATAGTTCG CCCCTCATGC ACAGCATTCA ATGGCAACCG
ACAGAAAAGG GAAATATCGA AGTGCTCAAC GACACAGCTG ATCTCTACCG CTACGGGAAT
TACACGGCTA TCGCTGAATT CCTCTATCAC GCTGTCGAAC AAACTATCTC TGAACTTCTC
CCAAAAGAAG TTCACTACCT GACATGTTAT GATAAAGCCC GGAAAGCAAT CGGAAACCGT
ATTGATATGC CCGCCAACCA GATACGCAAC CTGATCATGT TCATCACCCA AAACGATATG
AAACTTCCCT TGAGAAGACG CCAGAAGGAA TTTGCCGCTT TGAGCGATGA GGAAGTGTTG
GCAATTGAAT CAGATGTCGC TCAGGCTTTT TCAGTGCAAG AGAAATAA
 
Protein sequence
MGLSVMLHLL RYRELVVVHY SGVPCALHLQ HAQQSLNVGS TIMPDKIPTI AEACITIDSH 
RSWIGYAALQ HALGCEAPLR ERCAVSSGHV HGSVRLDKGI RLYDQRYRPN NDVAGHLFFS
LKHETLDLLV LKEILVCLGG ETITEIVQTY RQKQLARKLW FLYEWLTAER LPLDDAETRI
RYVPILDSTH YFTGSNRPSA RHRIIDNLPG NRSFCPLIHK TAVLQKFIAL DLSDKVRKVM
GRASRDVWRR AASFLLLADS RASFAIEGER PPRNRIERWA QVIQKSGNRP LSMTEILNMH
GALIQDHRFV TAGFRTEGVF LGERDRNGEP QPEFIGARPQ DIESLVKGLV DSHRIMAEAS
IDPVIHAAAI AFGLVFIHPF EDGNGRMHRA LIHQILTERS FAPPGIVFPV SAVILERIEE
YQRILREYSS PLMHSIQWQP TEKGNIEVLN DTADLYRYGN YTAIAEFLYH AVEQTISELL
PKEVHYLTCY DKARKAIGNR IDMPANQIRN LIMFITQNDM KLPLRRRQKE FAALSDEEVL
AIESDVAQAF SVQEK