| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0864 |
|---|
| Symbol | |
|---|
| ID | 6374531 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 930912 |
|---|
| End bp | 931949 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642683372 |
|---|
| Product | efflux transporter, RND family, MFP subunit |
|---|
| Protein accession | YP_001959296 |
|---|
| Protein GI | 189499826 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGCAA ACAGGCTGTT TCATTATTTC TCTATGCTGC TGGGCGTTTT GTTGTTGTCT
TTCGGGATCA TAGCCTGTGA GAAAACAGTT CCCCGCGAGG ATATTTCGCA CTACACGTGT
CCGATGCATC CGCAGATCAG GATGGACGAT CCGGGATCAT GTCCTATCTG TGGAATGGAT
CTTGTTCCTG TCCTCAAAGA GGGTGCGGGC CAGGAGGATC ATTCCTCACA TGAGCATGCG
GCTCATGATA CTCAGGAAAG CACGGATACA GAAGGCATTC GTATTGATCC CGTGCGAACC
CAGAATATCG GAGTCAGGAC TGACAGTGTT GCAGTTCGTT CTCTCACCCG GTCATTTATC
ATGTACGGAA AGGTTGCATA TGATCCTGAA CTCTGGGTGG CGCAAAATGA ATATATCGAA
GCGTTGAAAC TTGGGGACAG CTCTCTCATT CGATCCGCAG AGCTGAAACT TCAGTTCCTG
GGCCTTTCTC AGGAATGGAT CGGGCTGATC AAAAAAGAGC GTAAACCGGA CTTGGGTATT
CATCTGCCTT CCGGGATTGC GCGAGGGTAT TTTGAGGCTT TTATCAATCA GGGAGATGTG
GGAACTGTCA AGGTCGGCCA ACAGGTGGAT ATTCTCGATG AAAAGGGGCG TGTCCTGCAG
CAGGGGGTTA TTGAGGCCAT TGGGGTGCTT GTCGATCCGA AGACCAGACT TGTTCGGGCT
TTGGTCAGAT CCGGGAAAAG TATTGACCTG AAGGCAAACA CTTTTGTGCA GTTCCGGATT
CTGATTCCGT TAGGCCGGCG CCTGAGTGTT CCGCGTGAGG CCGTTCTTTT CAACGGGGAT
CACAATATGG TGTATGTCGT CGCAGATAGC GGTCGCTTTG TTGCCAGAAG GATCGAGCTT
GGTGACGAAG CTGAAGGTTA TTTTGAGATC AGGTCAGGTA TTGAAGAGGG GGCATCTGTT
GTGACCAACG GACACTTTTT AATCGATTCG GAAACCCAGA TAAAAACGGG CGGTACAGGT
GCGGGCCATC AACATTAG
|
|---|
| Protein sequence | MRANRLFHYF SMLLGVLLLS FGIIACEKTV PREDISHYTC PMHPQIRMDD PGSCPICGMD
LVPVLKEGAG QEDHSSHEHA AHDTQESTDT EGIRIDPVRT QNIGVRTDSV AVRSLTRSFI
MYGKVAYDPE LWVAQNEYIE ALKLGDSSLI RSAELKLQFL GLSQEWIGLI KKERKPDLGI
HLPSGIARGY FEAFINQGDV GTVKVGQQVD ILDEKGRVLQ QGVIEAIGVL VDPKTRLVRA
LVRSGKSIDL KANTFVQFRI LIPLGRRLSV PREAVLFNGD HNMVYVVADS GRFVARRIEL
GDEAEGYFEI RSGIEEGASV VTNGHFLIDS ETQIKTGGTG AGHQH
|
|---|
| |