| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0858 |
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| Symbol | |
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| ID | 6374525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 924155 |
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| End bp | 925585 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642683366 |
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| Product | Mur ligase middle domain protein |
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| Protein accession | YP_001959290 |
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| Protein GI | 189499820 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
[TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00257993 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCAC TGTATTTTAT CGGTATAGCC GGAACAGCCA TGGCGTCTGT TGCTGTAGCG
CTTTCAAGGG CGGGACACCG GGTTGCGGGC TCCGACAGTG CCCTCTATCC GCCGATGAGC
GACTATCTCA ACAAACACCG GATTCCATGT CATACGGGTT TTGATCCGCT GAACATTCTC
AGAGACGCAC CGGACGTTAT CGTCGTGGGC AATGCGATCA GCAGAGGAAA CCCGGAGCTC
GAGGCTGCGC TGAACGAACA CATGAACCTT GTATCGATGC CGGAGATCGT TCGCCGGGAA
CTTATCGGGA AAAACAGATC GATCGTCATT ACCGGCACTC ACGGCAAAAC AACAACAACC
TCCCTCACCG CATGGCTGTT CGAGCATGCA GGCCTGACAC CGGGGTTTCT GATCGGCGGC
ATCGCTGAAA ATTTCAACGC CGGATGCAGG GCATCAGGCA AAAAAAAGGG CGGCCACTTC
ATAACAGAAG GTGATGAATA CGATACCGCA TATTTTGATA AAAGGAGCAA GTTTCTGCAT
TACCGCCCGG ATATCGCGGT AATCAACAAC ATAGAATTCG ACCATGCTGA TATATTCAGT
TCCCTTGACG ATATCGTAAA ATCCTTCAGG CAATTCATAG CGCTTATCCC TTCAAACGGT
CTGCTGATTG TCAACGGCCA TGACACAATC GCCTCGGAAA TAAGCAGTCA GGCGTTCTGT
CCGGTTGAGC GGTTCGGCAT GTCCGAAGCG TTCGAGTGGT CGGTTTCCGA TATCGATGTC
AGCGAAACAG AAACCTCTTT CCAACTGGCT CACAAAGGAA ACATTGCAGG AACTATCCGG
ATCGACCAGT TCGGCAGCCA TACTATTCTC AACACCGTCG CTGCCGTTGC AGCGGCCTCT
CATGCAGGCA TCCCCTTTCC GGTTATTGCC GAAGGAGTCC GTTCTTTCAA AAGACCGAAA
AGAAGAATGG AGATTGTTGG AGAATTCGAT AACGGCATCA CGCTCATCGA CGATTTCGCG
CACCACCCCA CCGCTATCAG CGCAACCCTT TCGTCGTTAC GCCAACGGTT CCCCGAAAGA
AGAATACTGG CCTGCTTTGA GCCCCGATCA AATACCAGCA CAAGAAACAT ATTTCAGAAG
GATCTGGAAA ACAGCTTCAG TGATGCCGAT ATTGTTATTA TCGGCAAGGT TCATCGACCT
GAACGATATG CAGAACATGA ACGTCTCGAC ACACAAAAAC TCTGTTCGTC TCTCGCCGGT
TCAGGAAAAA AGGTATTTCA GTCCGGAAAA GATCCTGCCG GCTACCCGGA GGATATCGTG
AGGTTTATTC ACGAAAACAT CAGACCTGAT GACCTTATTA TCCTGTTGAG TAACGGCAGT
TTCAACGGAT TAAAAACAAG TTTAACCGAA AGTTTTCTTA AAAAAGGCTG A
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| Protein sequence | MSSLYFIGIA GTAMASVAVA LSRAGHRVAG SDSALYPPMS DYLNKHRIPC HTGFDPLNIL
RDAPDVIVVG NAISRGNPEL EAALNEHMNL VSMPEIVRRE LIGKNRSIVI TGTHGKTTTT
SLTAWLFEHA GLTPGFLIGG IAENFNAGCR ASGKKKGGHF ITEGDEYDTA YFDKRSKFLH
YRPDIAVINN IEFDHADIFS SLDDIVKSFR QFIALIPSNG LLIVNGHDTI ASEISSQAFC
PVERFGMSEA FEWSVSDIDV SETETSFQLA HKGNIAGTIR IDQFGSHTIL NTVAAVAAAS
HAGIPFPVIA EGVRSFKRPK RRMEIVGEFD NGITLIDDFA HHPTAISATL SSLRQRFPER
RILACFEPRS NTSTRNIFQK DLENSFSDAD IVIIGKVHRP ERYAEHERLD TQKLCSSLAG
SGKKVFQSGK DPAGYPEDIV RFIHENIRPD DLIILLSNGS FNGLKTSLTE SFLKKG
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