Gene Cphamn1_0828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0828 
Symbol 
ID6374495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp891622 
End bp892353 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content51% 
IMG OID642683336 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001959260 
Protein GI189499790 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGATG TTATCATTCT TACCGGAGCA GGCAAAGGTA TCGGAAAGGC GATCGCGATT 
GAATTTGCCT CAAGGGCAAA GAACGATCCC GGGTTCAACC CCTCCCTGGT ACTCTGTTCC
AGATCGCCTG AAGACCTCGA CGCACTCGCA GCACAATGTC GGTCTGCAAA AATACAAACC
CTTTCGGTCG TCGCTGACAT AGCGCGCCGT GAAGACAGAG AACGTCTTGT GGAACAGACT
CTTCTGGAAT TCGGCACCAT TGACTGCCTG ATCAACAATG CCGGTGTCGG GCGGTTTAAA
AACCTTACTG AATTCAGCGA AGAGGATTTT GACTATACCA TGTCTGTCAA CACAAAAGGC
ACCTTTTTCC TGACCCAGAA AGTCTTTCCC GTACTGGAAA AAAAACGCTC AGGCCATATT
TTCTTCATCA CCTCCATCGC CGCAGAAACA GCGTTTAAAA GCTCAGCGGT ATACTCCATG
TCAAAGTTCG CCCAGAAAGG CCTGATCGAG TCACTTCGGC TTTATGGAAG GGAGTGTAAC
GTCAAAATAA CCAACGTGAT GCCGGGAGCG GTCTGCACTC CCATGTGGGG AGAAGCGGGA
GAAACGTTAC GAAACGTAAT GATGATGCCC GAAGATGTTG CAGGACCCGT TGTCGACGCC
TACCTGCAAC CCGCGAGAAC CTCCGTTGAA GAGATCGTTC TGCGACCGGT CGGAGGAGAT
ATCAATGAAT GA
 
Protein sequence
MTDVIILTGA GKGIGKAIAI EFASRAKNDP GFNPSLVLCS RSPEDLDALA AQCRSAKIQT 
LSVVADIARR EDRERLVEQT LLEFGTIDCL INNAGVGRFK NLTEFSEEDF DYTMSVNTKG
TFFLTQKVFP VLEKKRSGHI FFITSIAAET AFKSSAVYSM SKFAQKGLIE SLRLYGRECN
VKITNVMPGA VCTPMWGEAG ETLRNVMMMP EDVAGPVVDA YLQPARTSVE EIVLRPVGGD
INE