| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0812 |
|---|
| Symbol | |
|---|
| ID | 6374479 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 875503 |
|---|
| End bp | 877278 |
|---|
| Gene Length | 1776 bp |
|---|
| Protein Length | 591 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642683320 |
|---|
| Product | DEAD/DEAH box helicase domain protein |
|---|
| Protein accession | YP_001959244 |
|---|
| Protein GI | 189499774 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAAA ACAATGGTGA AACAGTAGAA TCTACAGGAT TCAAAGACCT CGGGCTTTCA
GGCCAGGTGC TTGACGCGCT GGAAAAAGTT GGTTACGAGA CACCGACCCC GGTTCAGCTG
CAGACTATTC CGATAATTCT CAAAGGCAGC GATGTTCTTG GCCAGGCACA GACAGGAACC
GGCAAAACAG CGGCATTCGC GCTGCCGCTT CTTTCTACAA TCGATCTGTC CAATGCATCT
CCGCAGGTGC TTGTCCTTAC ACCGACAAGG GAGCTCGCTC TGCAGGTGGC AGAGGCTTTC
CAGCGCTATG CAGCATGTAT GGAGGACTTT CATGTGCTGC CGATCTACGG CGGCCAGGAC
TATAGCGGTC AGCTTCGACG CCTCAGGCGG GGCGTTCATG TCGTTGTCGG AACTCCGGGA
AGGGTTATGG ACCATATCAG GAGGCAGACA CTGAACCTCG ATGGGTTGAA GACGCTCGTA
CTCGATGAGG CTGACGAGAT GCTTCGTATG GGATTTGTCG ATGATGTCGA GTGGATTCTT
GAAAAAACGC CTGCCACCCG TCAGGTCGCG CTCTTTTCCG CAACCATGCC GTCGGAGATC
CGCCGAATCA CGAGAAAATA TCTCCGTGAC TTCACGGAGG TCGCCATCAA GTCAAAAAGT
TCTACGGTTG AAAGCACTAC CCAGCGTTTT CTTCCGGTTT CAGGTCACCA CAAGCTCGAT
GCGCTGACCC GGATTCTGGA AATCGAGCAC TACGATGGAG TGATCATTTT TGTCCGCACC
AAGACACAGA CGGTTGAACT GTCCGAAAAG CTGAGGGCGC GAGGCTATGC CTCGGCTGCG
CTGAACGGTG ACATGATGCA GAATCATCGG GAAAAAACTG TCGGCCAGTT TAAGAAGAGC
GTCTATAATA TTCTCATAGC CACAGATGTA GCGGCAAGGG GACTGGATGT GGAACGGATC
AGTCATGTTA TTAATTATGA CATTCCCACC GATACGGAAA GTTACGTCCA TCGTATCGGT
CGTACCGGTC GTGCCGGCAG AAGCGGTGAG GCGATACTCT TTGTGACCCC TCGTGAGATG
TCAATGCTGC GAACGATTGA AAGGGCCATT CGTAAAAGAA TAGACAGGAT GGAGCTGCCT
TCGACTGAAA TCATCAATGA CAAGCGTGTC GCGCGTTACA AGCAGCAGAT CAGTGACACA
CTCTCTACCG CGGATCTTCA TTTTTTCCGT GAACTTGTTG AATCCTACTG TTTTGAGCAC
GATGTTACCG CTCTGGATGC CGCTGCGGCT CTTGCAAGTC TGTATCAGGG GGACAGTCCG
CTTCTGCTCA CGAAACAGAT GAAGCCTTTT GGACGGGAGC AAAAAGAGAG GAAAGGACGT
CAGGATCATG CCGATGGCCG TTCATTTAAA AGTAAAGGCA AAAAAGACCC TCTTTACGAA
GCGCTTGGTT TTGAGCGGTA CCGCATAGAA GTAGGAGAAA AACACGGTGT AAAACCCGGT
AATATTGCCG GCGCGATTAT CAATGAGATC GGTCTTGACG GAGACGCGGT CGGGCGGATT
ACCATATTTG ATGATCACAG TACTGTCGAA CTGCCTGCAG GAATGCCCAA AGATGTTTTC
ATGGATCTTA AAAAGGTACG TGTATGCGGG CTGAAGCTGC AAGCCTCAAA GGCAGACGAG
GGAGCCGGTT CACCCGGAAA GTATTCGGCA AAAAACAGCA GGAAAACAGC CAAAAGCTCT
AAACGCGTTC CGGGAGGAAA GAAAAAAAGA AAGTAA
|
|---|
| Protein sequence | MTKNNGETVE STGFKDLGLS GQVLDALEKV GYETPTPVQL QTIPIILKGS DVLGQAQTGT
GKTAAFALPL LSTIDLSNAS PQVLVLTPTR ELALQVAEAF QRYAACMEDF HVLPIYGGQD
YSGQLRRLRR GVHVVVGTPG RVMDHIRRQT LNLDGLKTLV LDEADEMLRM GFVDDVEWIL
EKTPATRQVA LFSATMPSEI RRITRKYLRD FTEVAIKSKS STVESTTQRF LPVSGHHKLD
ALTRILEIEH YDGVIIFVRT KTQTVELSEK LRARGYASAA LNGDMMQNHR EKTVGQFKKS
VYNILIATDV AARGLDVERI SHVINYDIPT DTESYVHRIG RTGRAGRSGE AILFVTPREM
SMLRTIERAI RKRIDRMELP STEIINDKRV ARYKQQISDT LSTADLHFFR ELVESYCFEH
DVTALDAAAA LASLYQGDSP LLLTKQMKPF GREQKERKGR QDHADGRSFK SKGKKDPLYE
ALGFERYRIE VGEKHGVKPG NIAGAIINEI GLDGDAVGRI TIFDDHSTVE LPAGMPKDVF
MDLKKVRVCG LKLQASKADE GAGSPGKYSA KNSRKTAKSS KRVPGGKKKR K
|
|---|
| |