| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0794 |
|---|
| Symbol | |
|---|
| ID | 6374461 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 849177 |
|---|
| End bp | 851384 |
|---|
| Gene Length | 2208 bp |
|---|
| Protein Length | 735 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642683302 |
|---|
| Product | UvrD/REP helicase |
|---|
| Protein accession | YP_001959226 |
|---|
| Protein GI | 189499756 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATTGATA TTTTAGAGCA GTTGAACGAT GTGCAGCAGC AGGCTGTTCA GAAAACAGAC
GGTCCCGTCA TGGTTCTTGC GGGAGCGGGT TCAGGGAAAA CCAGAGTCAT CACCTACAGA
TTAGCCTACC TGATCGGTCA GAAGCAGGTT GCGCCCCATC AGATACTTGC GCTGACCTTT
ACCAACAAGG CGGCAAACGA GATGAGACAG AGGATCGATG AACTTCTGCA CCCCGGAAGT
TCCCGGGGAC TATGGATAGG TACCTTCCAT TCCATCTTTG CCCGTCTGCT TCGCAACTAC
ATTCACCTTA TCGGATACGA CGGTAATTTT TCGATCTATG ATTCCGATGA CAGCAAAAGC
CTGATCAGGC AGGTGATGAA GGAGTTGCAC ATTCCGGTAG AGTCGGTGCC CGTAAACACC
GTTCAGGGTA TTATCAGCCG GGCGAAAAAC AACTTTATAC TTCCTGCCCA GTTTCATGCA
GGGGCTTCCG ATTATAACGG ACAGAAGGCG GCAGGAATTT ATGAGGTGTA TGCCCGCAGA
CTTCGTGAGA ACAATGCCCT GGATTTTGAC GATCTGCTCA TAAAGCCGCT GGAACTTTTT
CAGGAACAGC CGGCTGTTCT TGAACAGCTT CAGGACTATT TCCGCTACAT CATGATCGAT
GAATACCAGG ACACCAACCG TGCCCAGTAT CTTGTCGCGA AGTCACTGGC CGCCGTTCAC
CGTAATATTT TTGTTGTTGG TGACGATGCG CAGTCCATCT ATTCCTGGCG AGGAGCCGAT
ATCACCAATA TTCTGAATTT TCAGGATGAT TACCCGGATG TCTCAGCTTT CAAGCTTGTG
GAGAACTATC GCAGTACGCA GACGATCCTG CAGGCGGCTA ACGGCATAAT AAAGAGAAAC
AGCAGACAGA TTGAAAAAGA GCTTGTTTCC CATCAGAGCA CGGGAGAGCC CCTGACCCTG
CTTGAATCGT TCAATGAGAA GCGCGAGGCG GAAAAAGTCG GTGAGAACAT TCAGTCCCTG
AAACTCGTCA AAGGCTATGA TTACCGGGAT TTCGCGGTGT TTTACCGAAC CAACGCGCAG
TCAAGGGTGT TGGAAGATAT TTTTCGGATA CAGAGGATTC CCTACAGGAT TTTCGGCAGC
GTTTCGTTTT ATAAGCGAAA AGAGATCAAG GATGCCGTGG CGTATCTGAG GTTTATCAGA
AACGATCAGG ATACAGAGTC CCTGCTGCGC ATTATCAATT TTCCGCCAAG GAAAATCGGA
GAGGTCAGTA TAGGGAAACT TCGTGATTAT GCCGCGTCAC AAGGTATATC TGTTTATGAG
GCGATCCTTA AAGCCGAAGA GGCCGGTTTT CCTGCAAGGC TGAAAAATGC CCTGCAGGGA
TTCAGCGTCG TGATCGAGCA GTTGAAGCAT ATCGCGGTGG ATGGCTCGGT ATATGATGTC
CTTTCTTCTC TCTATGAAAG TACCGGTATT ACCTCGCTGC TTAAGGATGA GAATACTCCT
GAATCCATGG CTCGCCATGA AAACCTTCAG GAATTGCTCT CTATGGCAAG GGATTTTTCA
GATCACAATC CGGAAGCTAA CTCACTTGAC GAGTTTCTGA ATGGCATTTC TCTTGCAACC
GATTACAATG AAGTGCAGGA ATCAGATAAC TATGTTTCTC TCATGACGGT TCATGCGGCC
AAAGGTCTGG AGTTTCCGGT GGTGTTTATT ACCGGTCTTG AGGAGAGGCT TTTCCCTCTG
AATTACTACG AGACTGATGA ACTTGAAGAG GAGAGACGGC TTTTCTATGT CGCCGTGACA
AGAGCCCAGC AGAAGGTTTT TCTTTCATGG TCAAAGAGCC GGTATAACTA CGGTCAGCCT
CAGACCTGTC TGAGGTCCAT GTTTATCGAT GAAATTGACA GCAGTATTCT TGTTACGGAA
GGGGGGGGGG AACATGAACC CGGAAGCGGC AGATCGGCAG GCAGGGAAGG TTTCAGTAAC
AGCAGGCCCG CAGTGCCCGA TTTTGTTTCA GGTCGACGGG AGAGGGAGAA TCGGCCGAAA
GAGGCTTCAG GCCTGCAATC AGGCATGAGG GTGCATCATG CCATGTTCGG TCCGGGAATT
GTTCTTGCTG TTCAGGGTAG CGGTGAAGGA CAGAAAGCAC GGATAAAATT CAGAAATGCT
GGAGAGAAGA CATTGATGGT ACAGTATGCG AACCTGACTG TCGTATAG
|
|---|
| Protein sequence | MIDILEQLND VQQQAVQKTD GPVMVLAGAG SGKTRVITYR LAYLIGQKQV APHQILALTF
TNKAANEMRQ RIDELLHPGS SRGLWIGTFH SIFARLLRNY IHLIGYDGNF SIYDSDDSKS
LIRQVMKELH IPVESVPVNT VQGIISRAKN NFILPAQFHA GASDYNGQKA AGIYEVYARR
LRENNALDFD DLLIKPLELF QEQPAVLEQL QDYFRYIMID EYQDTNRAQY LVAKSLAAVH
RNIFVVGDDA QSIYSWRGAD ITNILNFQDD YPDVSAFKLV ENYRSTQTIL QAANGIIKRN
SRQIEKELVS HQSTGEPLTL LESFNEKREA EKVGENIQSL KLVKGYDYRD FAVFYRTNAQ
SRVLEDIFRI QRIPYRIFGS VSFYKRKEIK DAVAYLRFIR NDQDTESLLR IINFPPRKIG
EVSIGKLRDY AASQGISVYE AILKAEEAGF PARLKNALQG FSVVIEQLKH IAVDGSVYDV
LSSLYESTGI TSLLKDENTP ESMARHENLQ ELLSMARDFS DHNPEANSLD EFLNGISLAT
DYNEVQESDN YVSLMTVHAA KGLEFPVVFI TGLEERLFPL NYYETDELEE ERRLFYVAVT
RAQQKVFLSW SKSRYNYGQP QTCLRSMFID EIDSSILVTE GGGEHEPGSG RSAGREGFSN
SRPAVPDFVS GRRERENRPK EASGLQSGMR VHHAMFGPGI VLAVQGSGEG QKARIKFRNA
GEKTLMVQYA NLTVV
|
|---|
| |