Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0764 |
Symbol | |
ID | 6374429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 812760 |
End bp | 814946 |
Gene Length | 2187 bp |
Protein Length | 728 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642683271 |
Product | helicase, RecD/TraA family |
Protein accession | YP_001959197 |
Protein GI | 189499727 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0607896 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.527893 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGAAT CCCTTTCTGC TGATCCTAAA ATAGAACGGC TTGCAGGAAC GGTCGAAAGG ATCGTATTTC ACAGTGATGA TTCCGGTTTC AGCGTACTTC GTGTCAGGCT TAAAGGCAGC AGGGAGCCGG TGACGGTTAC GGGATGTATT GCCGCTGTCT CGGCAGGAGA GTTTGTTGAG AGTGTCGGGG AATGGATCAA TGACCGAACA TACGGGCTGC AGTTCAAGGC CAGCGAGGTG ACAGTTGTTC CTCCCGCGAC TGTCGAGGGG ATTGAAAAAT ATCTGGCTTC GGGAATGGTA AAGGGTGTGG GACAGCATTT TGCCAAAGAG CTGGTCCGGG CCTTCGGAGA GGAGGTTTTT TCGATTATCG AGAAAGAGCC GGAGACATTG CTGACGTTGC CGGGGATTGG CAAAAAGCGC ATGGAGATGA TTGTCGATGC CTGGAAGGAG CAGCAGGCGG TGAGAGATAT CATGGTGTTC CTGCAGTCTC ACGGCGTCGG CACCGCCAGA GCGGTTCGTA TCTATAAAAC CTATGGTGAT CAGGCTGTCA CGATAGTGAG CAGCAATCCG TACAGGTTGG TGCTGGATAT TCAGGGAATC GGTTTCAAAA CAGCTGACGC AATCGCCTCG AAACTGGGTA CACCCTCCGA TTCACCGGTT CGCGCTCGCG CAGGAGTTCG GCATGTACTG GGAGAGATAT CCGCTGAAGG ACATTGTGCC GCGACAAGGG AAAGACTTGT TACCGATACA GTAGCGCTGC TCGGGGTTGA TGATCAGGTT GTCGATAGGG CGATAAAAGA GGAGATCGTT AACGGCGGCC TTGTACAGGA TGATATCAAA GGCATTCCCT GTCTTTATCT TGCTTCTCTC TACAGAGCGG AAAGTAGTGT AGCCGCTTCA ATCAGGAGAC TGATCGAAGG TGAACCTCCC TGGGGCAGGA TCGATGCACA AGAGGCGGTG CAGAAGGTTG AATCTCTTAC CGGGCTTGTG CTTTCAGCTT CACAGGAAGA GGCCCTCAGG CTTGCGCTTG AAAGCAAGTT TCTTGTGATT ACCGGTGGTC CGGGGGTGGG GAAGACAACG CTGGTGAATG CCATTCTCTC GATTATCCGT TCACAAAAAC TGAAGATAGC GCTTTGCGCG CCTACGGGCA GAGCGGCAAA GAGGTTGACG GAATCCACGG GCCTCGAGGC AAAAACCATT CATCGTCTGC TTGAGTTTGA TCCTCATTCC TTTGATTTCA AACATAGTAC AGGCAAGCCC CTGACAGCAG ACCTTGTCGT CGTTGATGAA TCTTCGATGA TCGATGTGAC ACTGATGAGC AAGCTGCTTG CCGCAGTGCA GAATAGCGCA GCCCTGATAC TGGTGGGGGA TGCCGATCAG CTTCCTTCTG TCGGCCCGGG AGCTGTTCTT GACGACGTGA TCGCGTCAGA CGCTGTACCT GTTGTCAGGC TTACGGAGAT TTTCAGGCAG GCAGCCGAGT CGGAAATTAT TTCCAATGCT CACAGGATCA ACCGGGGCGA GATACCCTGT AGCGGCAATA GTGAACGGCT TGCTGATTTC TATTTTGTTC CGGCAGAAGA GCCGGACGAT ATTCGTTCCA AGCTGCTTGA AGTCGTTCTC AAACGTATTC CTTCAACGTT CGGTTTAGAT CCTGTCAGAG ATATTCAGGT GCTGACGCCG ATGAACCGTG GAGGGCTCGG AACAATTTCG CTCAATGCCG CGCTGCAAAA GGAACTGAAC CCGAACAGCA ATCGCGGTGT CGTTCGTTTC GGCACCAGCT ATTCGGATGG CGACAAAGTT ATTCAGTTGG TCAACAATTA TGATAAAGAG GTGTTCAATG GAGATATCGG GGTAATCACC TCTGTTGATG AAGATGAAAA ACAGGTGATC GTCGATTTTG ACAAACGATT GATCGAGTAT GAGTTCGGTG AGCTCGATGA GCTTGCCCTT GCGTATGCGA CCAGTATTCA TAAAAGCCAG GGCTCGGAGT ATCCCGCTGT GGTTATACCT CTTGCCATGC AGCATTTCCT GCTGCTCCGC AGGACCCTTC TCTACACTGC AGTGACCAGG GGGAAAAAAC TTGTCATGAT TATCGGCCAG CAAAAGGCGC TCGGTATGGC TGTGGGAAAC AGTGATGATT CAAAAAGAGT GACTAATCTC GCAGAGAAGC TGCGCAGGCA GTGGTAG
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Protein sequence | MQESLSADPK IERLAGTVER IVFHSDDSGF SVLRVRLKGS REPVTVTGCI AAVSAGEFVE SVGEWINDRT YGLQFKASEV TVVPPATVEG IEKYLASGMV KGVGQHFAKE LVRAFGEEVF SIIEKEPETL LTLPGIGKKR MEMIVDAWKE QQAVRDIMVF LQSHGVGTAR AVRIYKTYGD QAVTIVSSNP YRLVLDIQGI GFKTADAIAS KLGTPSDSPV RARAGVRHVL GEISAEGHCA ATRERLVTDT VALLGVDDQV VDRAIKEEIV NGGLVQDDIK GIPCLYLASL YRAESSVAAS IRRLIEGEPP WGRIDAQEAV QKVESLTGLV LSASQEEALR LALESKFLVI TGGPGVGKTT LVNAILSIIR SQKLKIALCA PTGRAAKRLT ESTGLEAKTI HRLLEFDPHS FDFKHSTGKP LTADLVVVDE SSMIDVTLMS KLLAAVQNSA ALILVGDADQ LPSVGPGAVL DDVIASDAVP VVRLTEIFRQ AAESEIISNA HRINRGEIPC SGNSERLADF YFVPAEEPDD IRSKLLEVVL KRIPSTFGLD PVRDIQVLTP MNRGGLGTIS LNAALQKELN PNSNRGVVRF GTSYSDGDKV IQLVNNYDKE VFNGDIGVIT SVDEDEKQVI VDFDKRLIEY EFGELDELAL AYATSIHKSQ GSEYPAVVIP LAMQHFLLLR RTLLYTAVTR GKKLVMIIGQ QKALGMAVGN SDDSKRVTNL AEKLRRQW
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