Gene Cphamn1_0764 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0764 
Symbol 
ID6374429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp812760 
End bp814946 
Gene Length2187 bp 
Protein Length728 aa 
Translation table11 
GC content52% 
IMG OID642683271 
Producthelicase, RecD/TraA family 
Protein accessionYP_001959197 
Protein GI189499727 
COG category[L] Replication, recombination and repair 
COG ID[COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 
TIGRFAM ID[TIGR01448] helicase, putative, RecD/TraA family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0607896 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.527893 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAAT CCCTTTCTGC TGATCCTAAA ATAGAACGGC TTGCAGGAAC GGTCGAAAGG 
ATCGTATTTC ACAGTGATGA TTCCGGTTTC AGCGTACTTC GTGTCAGGCT TAAAGGCAGC
AGGGAGCCGG TGACGGTTAC GGGATGTATT GCCGCTGTCT CGGCAGGAGA GTTTGTTGAG
AGTGTCGGGG AATGGATCAA TGACCGAACA TACGGGCTGC AGTTCAAGGC CAGCGAGGTG
ACAGTTGTTC CTCCCGCGAC TGTCGAGGGG ATTGAAAAAT ATCTGGCTTC GGGAATGGTA
AAGGGTGTGG GACAGCATTT TGCCAAAGAG CTGGTCCGGG CCTTCGGAGA GGAGGTTTTT
TCGATTATCG AGAAAGAGCC GGAGACATTG CTGACGTTGC CGGGGATTGG CAAAAAGCGC
ATGGAGATGA TTGTCGATGC CTGGAAGGAG CAGCAGGCGG TGAGAGATAT CATGGTGTTC
CTGCAGTCTC ACGGCGTCGG CACCGCCAGA GCGGTTCGTA TCTATAAAAC CTATGGTGAT
CAGGCTGTCA CGATAGTGAG CAGCAATCCG TACAGGTTGG TGCTGGATAT TCAGGGAATC
GGTTTCAAAA CAGCTGACGC AATCGCCTCG AAACTGGGTA CACCCTCCGA TTCACCGGTT
CGCGCTCGCG CAGGAGTTCG GCATGTACTG GGAGAGATAT CCGCTGAAGG ACATTGTGCC
GCGACAAGGG AAAGACTTGT TACCGATACA GTAGCGCTGC TCGGGGTTGA TGATCAGGTT
GTCGATAGGG CGATAAAAGA GGAGATCGTT AACGGCGGCC TTGTACAGGA TGATATCAAA
GGCATTCCCT GTCTTTATCT TGCTTCTCTC TACAGAGCGG AAAGTAGTGT AGCCGCTTCA
ATCAGGAGAC TGATCGAAGG TGAACCTCCC TGGGGCAGGA TCGATGCACA AGAGGCGGTG
CAGAAGGTTG AATCTCTTAC CGGGCTTGTG CTTTCAGCTT CACAGGAAGA GGCCCTCAGG
CTTGCGCTTG AAAGCAAGTT TCTTGTGATT ACCGGTGGTC CGGGGGTGGG GAAGACAACG
CTGGTGAATG CCATTCTCTC GATTATCCGT TCACAAAAAC TGAAGATAGC GCTTTGCGCG
CCTACGGGCA GAGCGGCAAA GAGGTTGACG GAATCCACGG GCCTCGAGGC AAAAACCATT
CATCGTCTGC TTGAGTTTGA TCCTCATTCC TTTGATTTCA AACATAGTAC AGGCAAGCCC
CTGACAGCAG ACCTTGTCGT CGTTGATGAA TCTTCGATGA TCGATGTGAC ACTGATGAGC
AAGCTGCTTG CCGCAGTGCA GAATAGCGCA GCCCTGATAC TGGTGGGGGA TGCCGATCAG
CTTCCTTCTG TCGGCCCGGG AGCTGTTCTT GACGACGTGA TCGCGTCAGA CGCTGTACCT
GTTGTCAGGC TTACGGAGAT TTTCAGGCAG GCAGCCGAGT CGGAAATTAT TTCCAATGCT
CACAGGATCA ACCGGGGCGA GATACCCTGT AGCGGCAATA GTGAACGGCT TGCTGATTTC
TATTTTGTTC CGGCAGAAGA GCCGGACGAT ATTCGTTCCA AGCTGCTTGA AGTCGTTCTC
AAACGTATTC CTTCAACGTT CGGTTTAGAT CCTGTCAGAG ATATTCAGGT GCTGACGCCG
ATGAACCGTG GAGGGCTCGG AACAATTTCG CTCAATGCCG CGCTGCAAAA GGAACTGAAC
CCGAACAGCA ATCGCGGTGT CGTTCGTTTC GGCACCAGCT ATTCGGATGG CGACAAAGTT
ATTCAGTTGG TCAACAATTA TGATAAAGAG GTGTTCAATG GAGATATCGG GGTAATCACC
TCTGTTGATG AAGATGAAAA ACAGGTGATC GTCGATTTTG ACAAACGATT GATCGAGTAT
GAGTTCGGTG AGCTCGATGA GCTTGCCCTT GCGTATGCGA CCAGTATTCA TAAAAGCCAG
GGCTCGGAGT ATCCCGCTGT GGTTATACCT CTTGCCATGC AGCATTTCCT GCTGCTCCGC
AGGACCCTTC TCTACACTGC AGTGACCAGG GGGAAAAAAC TTGTCATGAT TATCGGCCAG
CAAAAGGCGC TCGGTATGGC TGTGGGAAAC AGTGATGATT CAAAAAGAGT GACTAATCTC
GCAGAGAAGC TGCGCAGGCA GTGGTAG
 
Protein sequence
MQESLSADPK IERLAGTVER IVFHSDDSGF SVLRVRLKGS REPVTVTGCI AAVSAGEFVE 
SVGEWINDRT YGLQFKASEV TVVPPATVEG IEKYLASGMV KGVGQHFAKE LVRAFGEEVF
SIIEKEPETL LTLPGIGKKR MEMIVDAWKE QQAVRDIMVF LQSHGVGTAR AVRIYKTYGD
QAVTIVSSNP YRLVLDIQGI GFKTADAIAS KLGTPSDSPV RARAGVRHVL GEISAEGHCA
ATRERLVTDT VALLGVDDQV VDRAIKEEIV NGGLVQDDIK GIPCLYLASL YRAESSVAAS
IRRLIEGEPP WGRIDAQEAV QKVESLTGLV LSASQEEALR LALESKFLVI TGGPGVGKTT
LVNAILSIIR SQKLKIALCA PTGRAAKRLT ESTGLEAKTI HRLLEFDPHS FDFKHSTGKP
LTADLVVVDE SSMIDVTLMS KLLAAVQNSA ALILVGDADQ LPSVGPGAVL DDVIASDAVP
VVRLTEIFRQ AAESEIISNA HRINRGEIPC SGNSERLADF YFVPAEEPDD IRSKLLEVVL
KRIPSTFGLD PVRDIQVLTP MNRGGLGTIS LNAALQKELN PNSNRGVVRF GTSYSDGDKV
IQLVNNYDKE VFNGDIGVIT SVDEDEKQVI VDFDKRLIEY EFGELDELAL AYATSIHKSQ
GSEYPAVVIP LAMQHFLLLR RTLLYTAVTR GKKLVMIIGQ QKALGMAVGN SDDSKRVTNL
AEKLRRQW