| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0750 |
|---|
| Symbol | |
|---|
| ID | 6374415 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 797634 |
|---|
| End bp | 798944 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642683258 |
|---|
| Product | putative type I restriction-modification system |
|---|
| Protein accession | YP_001959184 |
|---|
| Protein GI | 189499714 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0732] Restriction endonuclease S subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.769779 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.272821 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTCC CGCGCTATCC GAAATACAAG GCCAGCGGCG TGGAGTGGCT GGGGGAGGTG
CCGGAGCATT GGCAGATGAT CAATAGCCGC CGGTTATTCC ACCAAGCAAA GGAATCACCC
TTAACCGACG ACATCCAACT CTCAGCGACC CAAAAATACG GGGTTGTCCC TCAGAGCCTT
TTTATGGAAA GCGACGGTAA AGTCGCTCTA GCGTTAAGCG GACTAGGGAA TTTTAAACAC
GTCGAAGTAG ATGATTTTGT GATCAGTCTC CGCAGTTTTC AAGGAGGTAT CGAGCGGAGC
AAATATTCAG GTTGCGTCAG CCCTGCTTAC ACCGTGCTGC GCCCGGCGGA ACCTATTGAT
GGAAGCTATT GGGGCTTCCT ACTGAAATCA CGCCGATACG TCGAGATCCT CCAAACGATG
AATGATGGGT TACGGGATGG CAAAAGTATC AGTTACCAGC AGTTCGGACA AATCCCCTTG
CCTTCCCCGC CCCTCGCCGA GCAAACGGCC ATTGCGGAGT TTCTGGACCG GGAGACGGGG
AAGATTGATG AGCTGGTGGC GGAGCAGCGG CGGCTGATGG AACTGCTGAA AGAAAAACGT
CAGGCTGTCA TCTCCCACGC CGTCACCAAA GGCCTCAACC CCCACGCCCC CATGAAGCCT
TCCGGCATCG AATGGCTCGG CGATGTGCCG GTGGGGTGGA GCGTGCTCAA ACTCGGAAAC
ATTTCTCGTT TTAAAGGGGG GGCAGGGTTT CCCGATAGCT ACCAAGGTCA AACAGACAAC
GAGATTCCGT TCTTTAAAGT CGGAGATATG GTGAACGCTG ACGACGCTCG CGTAATGCGG
AGAGCTAATC ACACAATCAC TGAAGCTACA GCGAGAGAGC TGCGTGCTTT TGTCTTTCCT
GAAAGCACCA TCGTGTTTGC CAAGGTTGGC GCTGCCTTAC TCCTGAAGCG ATACCGGTTA
CTTGGGCAAA GGTCTTGCAT CGACAACAAC ATGATGGGAA TGACCGTGGG GGACGGTAGT
TCGGTCGATT ATCTGCTCTA TGTTCTCCCG CTACTTGATC TCGAATTAAT TGTTAACCCC
GGGGCCGTGC CATCAATCAA TGAAGGTCAG ATTTCTGGCC AACGGATCGC ACTTCCTCCG
ATTGATGAGC AGCGAGAAAT TGTTGAATTT CTCACCTCAG TAACCGCCAA ATTCGACACC
CTCACCGCCG AAGCGCAACG CACCATCGAC CTGCTGCAAG AACGCCGCAC CGCGCTCATC
TCCGCCGCCG TCACCGGGCA GATTGATGTG CGCCAACCAC CCCGGAACTA A
|
|---|
| Protein sequence | MSFPRYPKYK ASGVEWLGEV PEHWQMINSR RLFHQAKESP LTDDIQLSAT QKYGVVPQSL
FMESDGKVAL ALSGLGNFKH VEVDDFVISL RSFQGGIERS KYSGCVSPAY TVLRPAEPID
GSYWGFLLKS RRYVEILQTM NDGLRDGKSI SYQQFGQIPL PSPPLAEQTA IAEFLDRETG
KIDELVAEQR RLMELLKEKR QAVISHAVTK GLNPHAPMKP SGIEWLGDVP VGWSVLKLGN
ISRFKGGAGF PDSYQGQTDN EIPFFKVGDM VNADDARVMR RANHTITEAT ARELRAFVFP
ESTIVFAKVG AALLLKRYRL LGQRSCIDNN MMGMTVGDGS SVDYLLYVLP LLDLELIVNP
GAVPSINEGQ ISGQRIALPP IDEQREIVEF LTSVTAKFDT LTAEAQRTID LLQERRTALI
SAAVTGQIDV RQPPRN
|
|---|
| |