| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0729 |
|---|
| Symbol | |
|---|
| ID | 6374394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 770854 |
|---|
| End bp | 771087 |
|---|
| Gene Length | 234 bp |
|---|
| Protein Length | 77 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642683238 |
|---|
| Product | SpoVT/AbrB domain protein |
|---|
| Protein accession | YP_001959164 |
|---|
| Protein GI | 189499694 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4456] Virulence-associated protein and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.295778 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00050185 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGATACAG CACGCATTTT TCAGTCCGGC CGCAGCCAGG CCGTTCGTTT GCCAAAAAAA
TACCGGTTTC AAGGAAAGGA AGTTTATGTG AAGCATTTTG GCAATGGCGT TCTTCTTTTG
CCTATCGACA AATCTTGGGA CACACTGGAA GCTGCTCTGC AAGCATTTGA ACCTGAGTTT
CGCCTTGAGC GTGAACAACC GATTGAACAG GAGCGGGAGG AAATTGCTTC ATGA
|
|---|
| Protein sequence | MDTARIFQSG RSQAVRLPKK YRFQGKEVYV KHFGNGVLLL PIDKSWDTLE AALQAFEPEF
RLEREQPIEQ EREEIAS
|
|---|
| |