Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0728 |
Symbol | |
ID | 6374393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 770459 |
End bp | 770857 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642683237 |
Product | PilT protein domain protein |
Protein accession | YP_001959163 |
Protein GI | 189499693 |
COG category | [R] General function prediction only |
COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.741529 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000801582 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTTATC TGCTGGACAC CAATATCTGC ATTTACATTA TCAACAACCG ACCTGAAAAG GTATTGCAAC GATTTCGCAA GGAACGCATC GGCAATGTCG GTATATCAAG CATTACGGCT TCAGAGCTGA CCTATGGCGT CGTCAAGAGT GCTTCGGAAA GGAACCGACT GGCGTTGGAA TTGTTTCTGG CACCGTTTGA AATCTATCCA TTCGATGAAT CGGTTATCTG GCATTACGGT GAAGTTCGAG CAGATCTTGA AAAACGAGGC AAGCCTATTG GTGCTCTTGA TACCATGATC GCAGCTCATG CTCTCGCACT GAACTCGATA CTGATAACGA ATAATACCCG TGAATTCAAC CGGGTAGAGG GCCTGCATTA TGAAAACTGG GCACAGTAG
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Protein sequence | MSYLLDTNIC IYIINNRPEK VLQRFRKERI GNVGISSITA SELTYGVVKS ASERNRLALE LFLAPFEIYP FDESVIWHYG EVRADLEKRG KPIGALDTMI AAHALALNSI LITNNTREFN RVEGLHYENW AQ
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