Gene Cphamn1_0707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0707 
Symbol 
ID6374372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp743860 
End bp747159 
Gene Length3300 bp 
Protein Length1099 aa 
Translation table11 
GC content51% 
IMG OID642683219 
Producttype III restriction protein res subunit 
Protein accessionYP_001959145 
Protein GI189499675 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGAG GTAAATCAAA AGGTCTGCAA TCTCATGATT TTCGCAACAA GCTGCTGCTC 
AATCAATGGT TGATCAGCCT TTTTGGTATC GATCCACTTG TCGAGCACAT CCTTCGGGGT
CAGAAGGTGA GGCCATTCCG TCTGCTTGCC GATCCGATCA GGGATGCCCG CCTTGAAGGG
CGGGACAAGG ATAATCTGCA TTACTTCTAT CACTACCTCG GCGACAGCCC TCTGTTCTCA
ATGGCTGGTG TTGAAAATGA CCGGTTCCGC ATCAGCCGCG AAATGCTGCT CAGATATGAG
GAGAATATCG TAAGCCACAC CAGGGCGATC AACGAGAACC GCCATCGCCC GGTTATCTGG
AAATATTACC AGTGGCTGAC GTTGCTGTTC ACCGAAATCT ATCTCGACCG CTTTTTCAGA
GATCGAGAGG CCCTGCTTTC GGAACTGAAC GCCTTTGTCG AGCGCTTCAA CCAGCATTGT
AGCAACTGGG AAAAGCCTTT CGCTGCGGTG CCGCCGTATC GTGACGATGA CCTCAACAAG
CTTTGTCTTC AGAATGCCAC AGGCAGCGGC AAGACGCTTC TGATGCATGT CAATCTCCTC
CAGTACCGCC ACTATGCTGA AAGGAGTGGA AAGGGAAGTG ATCTTTCGCG CGTGATTCTG
CTTACACCGA ATGAGCGTCT TTCGGAACAG CATATCGCAG AGTTCAGGGA GAGCAGTTTG
CTTGCCTCGC ATTTTGCGCA GGAGGGGCAT AACCTGTTTA CGCAGACCAC CGGGCTGAAA
CGGGTCGATG TGCTTGAAAT CACCAAACTC GGCGAACAGG AAGGCCCCAA TACGATTGCT
ACCCGCAGTC TTGGCGACCA GAACCTGCTT CTGGTCGATG AAGGCCATCG GGGAATGAGC
GGTAAGGATG AAGGTGCCTG GTTCAGGCGG CGCTCAGAGC TTTGCGCCAA GGGATTCACC
TTCGAGTATT CGGCAACATT TGAACAGGCG GTTCAGGCTT CCGGAAAAGC TGATTTTGAA
AACGGGTATG CAAAAGCCGT GCTGTTCGAC TACTCCTACC GGTGGTTTTA CGAAGACGGG
TTCGGCAAGG ACTATCAGAT TCTGAACATG CCCGCAACAT TCGCGCAGGT TCAGTTTGCC
TACTTGACCG CCTGCTTGCT CAAGTTTTAC CAGCAGTTGC GGATTTATGA GGAGAAAACC
CGCGAGTTCG AGGCCTTCAA TCTTGAGAAG CCGTTATGGG TGTTTGTCGG AAGCACCGTT
TCCAAGGCGA AGGGAGGCAC CAGTGATGAA AAGGTTGTTG CTGCCGATGT CGCCCAGATT
ATCTGTTTCA TCGCTGAGTT TCTTGAAAAG CAGGTCGAGA GCCAGAACGC CATCAATGCC
TTGCTTACCG GCAAAGGTCA GGATACCGGC CTGTTGGACA AAGATGGGAA CGATATTTTT
GCCGGAGCCT TTACCTACCT TGCCCAGGCA ATGAACGCAG GTGAGATCAT CGACGATCTT
TTCCGGGATA TTCTCTCAAG GCTTTTCAAC AATGCTGCCG GGGGTACCCT GTTTCTTGAC
CGGATCAAAG GCGAATCAGG TGAAGTGGCG CTGAGAGTTG GCAATGCAGA CGAGCCATTC
GGCTTGATAA ATGTCGGTGA TGCCAAAAGC CTTTGTGAGC ATGTCGAGGA GGTCGCAAAG
CAGAACGGCG TTCGCCTTCA GGTTGAGGAC AGTGACTTTA CCGAGGCGAT GTTCGCTTCA
GTGAAGGATT CTTCTTCAAA GGTCAACCTG CTCATCGGCT CCAAGAAATT CATCGAAGGA
TGGGATTGCT GGCGAGTCAG CACGATGGGC CTGATGCACG TCGGGAAGTC TGAAGGTGCA
CAGATCATTC AGCTTTTTGG CCGTGGTGTC CGGTTGAAAG GGTATGAATG GAGCCTGAAG
CGTAGTGGCC ACACTCATGC ACCGGTTAAG CCAAACTTCA TCGAGGAGCT GGAAACCCTG
AATGTGTTCG GCATCGAAGC GGACTTCATG GAGAAGTTCC GCGAATTCCT GAGAGAAGAA
GGACTTCCCG GCAACGAGCG TCGCAAAGTC ATTATGATTC CCCTGAATGT CACCTATGAC
TTCGGTAAGA AGCTCAAAAT CCTTCGACCA AAACGGAAAG CCTCTGATGG AAAGGAATAC
GACTTCAAAA AAGATGCTCC GGTTCCTGCT GTCGGTCATG TTCCGGATTA TATGATGCAC
AATACCGTTG TTTCTGACTG GTATCCTCGC ATTCAAGCCA TTCGTTCACG AGGTGCGATT
ACAGTAACCA GCAAAGACAA GGTTTCCTTG CGCGAACAGC ATCTGGCCCT GCTTGATTAC
GACCAGCTCT TTTTTGAACT CGAACAGTTC AAGCGCGAAC GGAGCTGGTA TAACCTCAAC
ATTACCAAGA AGGGAATTAC CAGCCTGCTC AGGAACCCCG GATGGTACAC GCTCTATTTG
CCGGAAACCC GTCTGAATCC GACAAGCTTT GACGGCGTTC TTTTGTTGCA GCAGGTGGCC
TCAGAGCTTC TGAAACGGTA TTGCGAGCAC TATTACAACT ACTGCAAGCG GGAGTACATC
GAACCGCGTC TCGAACTTCG CGATCTGACA CTCGATGACG ACAATATTCC GCAGGAGGAG
TTGTACCAGC TGATCGTCGA TGGCGATGAA GAGCAGGTTA TTCAGGGAAT CGAGCAGATC
AAGAAGGATC TGGAGCAGAA GAAGGATGAC CTGCTGAAGG TTGGAGACCT GAACGCCTGT
AATTTCGGCA AACACCTGTT CCAGCCGCTT TTTCATGTCC GTCGAGGCGG CAAAATAACC
ATCCTGCCAG TAGCCCTCAA CGAAAGCGAA TATCAGTTTG TCACTGATCT GAAAGGCTGG
TGCGATGAGC GCAAATCCGC TCTGGAAAAG GATGGAATGG AGCTTTTCCT GCTCAGAAAT
ATGAGCCGGG GTAAAGGTGC CGGATTCTTC GAGGCTGGCA ACTTCCATCC GGATTTTATC
CTCTGGTTGC TTGTTGGCGG AAAACAGTAT ATCACCTTCA TCGAACCTCA CGGCCTGCTG
CACGAAGGCC CAGCCAGCGA GAAAGTACTG TTCCACAAAC GAATTAAGAG CATCGAGCAG
CGCCTCAACG ACCCATCCGT GATTCTGAAC AGCTTTATCC TGTCATGGAC TCCATATCCG
CAATTGAAAT GGGGAGACAC CCAGTCCGAG CTTGAGCAAC GGCATGTCCT TTTTATGACC
GATGACCGTG ATGGGTATAT TGACAAGCTT TTTGCCAAGT TAATGGAGAT GGTGAAATGA
 
Protein sequence
MARGKSKGLQ SHDFRNKLLL NQWLISLFGI DPLVEHILRG QKVRPFRLLA DPIRDARLEG 
RDKDNLHYFY HYLGDSPLFS MAGVENDRFR ISREMLLRYE ENIVSHTRAI NENRHRPVIW
KYYQWLTLLF TEIYLDRFFR DREALLSELN AFVERFNQHC SNWEKPFAAV PPYRDDDLNK
LCLQNATGSG KTLLMHVNLL QYRHYAERSG KGSDLSRVIL LTPNERLSEQ HIAEFRESSL
LASHFAQEGH NLFTQTTGLK RVDVLEITKL GEQEGPNTIA TRSLGDQNLL LVDEGHRGMS
GKDEGAWFRR RSELCAKGFT FEYSATFEQA VQASGKADFE NGYAKAVLFD YSYRWFYEDG
FGKDYQILNM PATFAQVQFA YLTACLLKFY QQLRIYEEKT REFEAFNLEK PLWVFVGSTV
SKAKGGTSDE KVVAADVAQI ICFIAEFLEK QVESQNAINA LLTGKGQDTG LLDKDGNDIF
AGAFTYLAQA MNAGEIIDDL FRDILSRLFN NAAGGTLFLD RIKGESGEVA LRVGNADEPF
GLINVGDAKS LCEHVEEVAK QNGVRLQVED SDFTEAMFAS VKDSSSKVNL LIGSKKFIEG
WDCWRVSTMG LMHVGKSEGA QIIQLFGRGV RLKGYEWSLK RSGHTHAPVK PNFIEELETL
NVFGIEADFM EKFREFLREE GLPGNERRKV IMIPLNVTYD FGKKLKILRP KRKASDGKEY
DFKKDAPVPA VGHVPDYMMH NTVVSDWYPR IQAIRSRGAI TVTSKDKVSL REQHLALLDY
DQLFFELEQF KRERSWYNLN ITKKGITSLL RNPGWYTLYL PETRLNPTSF DGVLLLQQVA
SELLKRYCEH YYNYCKREYI EPRLELRDLT LDDDNIPQEE LYQLIVDGDE EQVIQGIEQI
KKDLEQKKDD LLKVGDLNAC NFGKHLFQPL FHVRRGGKIT ILPVALNESE YQFVTDLKGW
CDERKSALEK DGMELFLLRN MSRGKGAGFF EAGNFHPDFI LWLLVGGKQY ITFIEPHGLL
HEGPASEKVL FHKRIKSIEQ RLNDPSVILN SFILSWTPYP QLKWGDTQSE LEQRHVLFMT
DDRDGYIDKL FAKLMEMVK