| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0701 |
|---|
| Symbol | |
|---|
| ID | 6374366 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 734796 |
|---|
| End bp | 735929 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 642683214 |
|---|
| Product | Extracellular ligand-binding receptor |
|---|
| Protein accession | YP_001959140 |
|---|
| Protein GI | 189499670 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0183935 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACC TGAAGAGTAT CAAAGCTTCG GTTGTAATGT TAGCAATGCT CATTACCGCA
GGAATTTTTG CAGCCGGATG CTCACCGCAA CAAAATAAAA CAGAGGGAAT TACCATTGGA
GTTCTTCTGC CTTTGACGGG AGAACTTGCC AGTTACGGAG AGCCCATGAA GAAAGGAGCT
GAGATTGCAC TTGAACAAAT AAGCACAGAA AACAAAGGGG AAGAATACAA GTACAATGCG
GTTTATATTG ATTCTCAGGC CGACCCTAAA ACTGCTGTTT CAGGAATGCA AAAACTTGTT
TCTCTTAACG GTGCTTGTTA CATCATTGGT GATGTCAGCA GCTCGACAAC TCTTGCAATG
GTACCTATTG CTGAGAAAAA CAAGGTGTTT CTGCTTTCGC CCGGTGCATC ATCACCGAAA
TTGAGAGGCA TCAGTCCCTT TTTTGCGAGG AATTATCCAT CGAGTGTCGA GGAGTCTATC
GACTCGGCAG AATTCATTAA AAATGTCCTG AAAAAAGACA AGGTTGCTGT TGTGTATGTG
ACAAATGAAT ATGGATTAGG TTTGGTAGAC ATGTTCCAGA AAAAATATAC GGAGATTGGG
GGACAGGTTA CCATGAAGGA ACCATATAAA TTTGAGGAAT CTGATTTCAG GACTATCATT
GCCAAGCTGC GTCAAGAACA ACCTGAAGTT ATCTATCTGG CGGGCAACCA GAAAGAGATG
GGAAAATTCA TGAAACAGTA TGCGGAATCG GAAATTTCAG CCACTATTGT CTCAAACATC
AGTTTTCTGG AGCCGGACTG CATTAACGTT GCAGGAAAAG CTGCGGACGG AGTGATCGTT
CCCGTGCCGT ATTTTAATCC TGAAGACCCT TTAATGAAAG GAACTCATGC ATTTGCAGAG
TCATACAAGG CAAAATTCGG TGAGTATCCA TCCCTGGCTG TTGCCGTTGG ATACGATGCC
ATGATGCTTA TGAACAAAGC AGTGACAGAT GGAAACAATG ATCCTGAAAA AGCTGCAGAA
GTGATCAGAA ATCTCAAGAA GTATGACGGC GCAATGGGAA CTCTGAGTTT TACTGATGGC
GATGTAAGTG TCCCTATGGT CTTTAAGGTA GTTAAACCTG AATTGATCGA TTAG
|
|---|
| Protein sequence | MKNLKSIKAS VVMLAMLITA GIFAAGCSPQ QNKTEGITIG VLLPLTGELA SYGEPMKKGA
EIALEQISTE NKGEEYKYNA VYIDSQADPK TAVSGMQKLV SLNGACYIIG DVSSSTTLAM
VPIAEKNKVF LLSPGASSPK LRGISPFFAR NYPSSVEESI DSAEFIKNVL KKDKVAVVYV
TNEYGLGLVD MFQKKYTEIG GQVTMKEPYK FEESDFRTII AKLRQEQPEV IYLAGNQKEM
GKFMKQYAES EISATIVSNI SFLEPDCINV AGKAADGVIV PVPYFNPEDP LMKGTHAFAE
SYKAKFGEYP SLAVAVGYDA MMLMNKAVTD GNNDPEKAAE VIRNLKKYDG AMGTLSFTDG
DVSVPMVFKV VKPELID
|
|---|
| |